Difference between revisions of "TSS:Hg 196293.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000469223.5:15 uc064zaj.1:15 ENST00000376643.6:-67 uc064zai.1:-67 AK302926:102 ENST00000376610.6:171 uc064zak.1:171 ENST00000483656.5:213 uc064zal...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HD6= | ||
| + | |JM21= | ||
| + | |PPP1R90= | ||
|all_trans=ENST00000469223.5:15 uc064zaj.1:15 ENST00000376643.6:-67 uc064zai.1:-67 AK302926:102 ENST00000376610.6:171 uc064zak.1:171 ENST00000483656.5:213 uc064zal.1:213 ENST00000334136.9:217 uc004dks.2:217 ENST00000462730.5:238 uc064zam.1:238 ENST00000376619.6:256 uc004dkt.2:256 ENST00000477528.5:277 uc010nig.2:277 AL137696:277 ENST00000465269.5:286 uc064zan.1:286 BC005872:286 AK024083:296 NM_006044:302 AJ011972:302 ENST00000476625.5:304 uc064zao.1:304 AB020708:323 BC069243:324 ENST00000477561.5:332 uc064zap.1:332 ENST00000438518.5:-371 uc064zah.1:-371 AK295884:387 ENST00000423941.5:-390 uc064zag.1:-390 ENST00000481929.5:408 uc064zaq.1:408 ENST00000441703.5:409 uc064zar.1:409 BC011498:412 ENST00000426196.5:414 uc064zas.1:414 AK095124:415 ENST00000489352.5:429 uc064zat.1:429 | |all_trans=ENST00000469223.5:15 uc064zaj.1:15 ENST00000376643.6:-67 uc064zai.1:-67 AK302926:102 ENST00000376610.6:171 uc064zak.1:171 ENST00000483656.5:213 uc064zal.1:213 ENST00000334136.9:217 uc004dks.2:217 ENST00000462730.5:238 uc064zam.1:238 ENST00000376619.6:256 uc004dkt.2:256 ENST00000477528.5:277 uc010nig.2:277 AL137696:277 ENST00000465269.5:286 uc064zan.1:286 BC005872:286 AK024083:296 NM_006044:302 AJ011972:302 ENST00000476625.5:304 uc064zao.1:304 AB020708:323 BC069243:324 ENST00000477561.5:332 uc064zap.1:332 ENST00000438518.5:-371 uc064zah.1:-371 AK295884:387 ENST00000423941.5:-390 uc064zag.1:-390 ENST00000481929.5:408 uc064zaq.1:408 ENST00000441703.5:409 uc064zar.1:409 BC011498:412 ENST00000426196.5:414 uc064zas.1:414 AK095124:415 ENST00000489352.5:429 uc064zat.1:429 | ||
|chr=chrX | |chr=chrX | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-177 | |distance_to_tss=-177 | ||
|end=48801778 | |end=48801778 | ||
| + | |end_of_center_position=48801773 | ||
|entrez_id=10013 | |entrez_id=10013 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias=CPBHM | + | |gene_alias=CPBHM |
|gene_description=histone deacetylase 6 | |gene_description=histone deacetylase 6 | ||
|gene_id=10013 | |gene_id=10013 | ||
| Line 24: | Line 28: | ||
|species=human | |species=human | ||
|start=48801766 | |start=48801766 | ||
| + | |start_of_center_position=48801772 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000469223.5 uc064zaj.1 | |transcript_name=ENST00000469223.5 uc064zaj.1 | ||
Revision as of 20:47, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 48801772 |
|---|---|
| End of the center position in the TSS region: | 48801773 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000469223.5 uc064zaj.1 |
|---|---|
| Distance: | 15 |
| Num_trans: | 45 |
| All_trans: | ENST00000469223.5:15 uc064zaj.1:15 ENST00000376643.6:-67 uc064zai.1:-67 AK302926:102 ENST00000376610.6:171 uc064zak.1:171 ENST00000483656.5:213 uc064zal.1:213 ENST00000334136.9:217 uc004dks.2:217 ENST00000462730.5:238 uc064zam.1:238 ENST00000376619.6:256 uc004dkt.2:256 ENST00000477528.5:277 uc010nig.2:277 AL137696:277 ENST00000465269.5:286 uc064zan.1:286 BC005872:286 AK024083:296 NM_006044:302 AJ011972:302 ENST00000476625.5:304 uc064zao.1:304 AB020708:323 BC069243:324 ENST00000477561.5:332 uc064zap.1:332 ENST00000438518.5:-371 uc064zah.1:-371 AK295884:387 ENST00000423941.5:-390 uc064zag.1:-390 ENST00000481929.5:408 uc064zaq.1:408 ENST00000441703.5:409 uc064zar.1:409 BC011498:412 ENST00000426196.5:414 uc064zas.1:414 AK095124:415 ENST00000489352.5:429 uc064zat.1:429 |
TATA-Box annotation
| Distance to TSS: | -177 |
|---|---|
| Nearest PromoterID: | NM_001321229 |
| Entrez ID: | 10013 |
| Nearest Unigene: | Hs.6764 |
| Nearest Refseq: | NM_006044 |
| Nearest Ensembl: | ENSG00000094631 |
| Gene Name: | histone deacetylase 6 |
| Gene Alias: | CPBHM |
| Gene Description: | histone deacetylase 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
