Difference between revisions of "TSS:Hg 243971.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=U01925:-339 |chr=chrX |cpg_percent=0.005 |distance=-339 |distance_to_tss=4561 |end=101395456 |entrez_id=6173 |gc_percent=0.393035 |gene_alias=L36A|L44L|...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |L44L= | ||
| + | |MIG6= | ||
| + | |RPL44= | ||
|all_trans=U01925:-339 | |all_trans=U01925:-339 | ||
|chr=chrX | |chr=chrX | ||
| Line 6: | Line 9: | ||
|distance_to_tss=4561 | |distance_to_tss=4561 | ||
|end=101395456 | |end=101395456 | ||
| + | |end_of_center_position=48802661 | ||
|entrez_id=6173 | |entrez_id=6173 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
| − | |gene_alias=L36A | + | |gene_alias=L36A |
|gene_description=ribosomal protein L36a | |gene_description=ribosomal protein L36a | ||
|gene_name=RPL36A | |gene_name=RPL36A | ||
| Line 19: | Line 23: | ||
|species=human | |species=human | ||
|start=101395445 | |start=101395445 | ||
| + | |start_of_center_position=48802660 | ||
|strand=- | |strand=- | ||
|tata_box="34(CTTTTAATAGCC,+,0.00)" | |tata_box="34(CTTTTAATAGCC,+,0.00)" | ||
Revision as of 20:48, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 48802660 |
|---|---|
| End of the center position in the TSS region: | 48802661 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | U01925 |
|---|---|
| Distance: | -339 |
| Num_trans: | 1 |
| All_trans: | U01925:-339 |
TATA-Box annotation
| Distance to TSS: | 4561 |
|---|---|
| Nearest PromoterID: | NM_001199972 |
| Entrez ID: | 6173 |
| Nearest Unigene: | Hs.432485 |
| Nearest Refseq: | NM_021029 |
| Nearest Ensembl: | ENSG00000241343 |
| Gene Name: | RPL36A |
| Gene Alias: | L36A |
| Gene Description: | ribosomal protein L36a |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "34(CTTTTAATAGCC,+,0.00)" |
