Difference between revisions of "TSS:Hg 196297.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000493923.1:38 uc064zax.1:38 ENST00000468949.1:-72 uc064zaw.1:-72 AK303012:-72 BC013737:-141 BT006649:-159 AB385398:-159 AF132609:-159 KJ902051:-1...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |HD6= | ||
| + | |JM21= | ||
| + | |PPP1R90= | ||
|all_trans=ENST00000493923.1:38 uc064zax.1:38 ENST00000468949.1:-72 uc064zaw.1:-72 AK303012:-72 BC013737:-141 BT006649:-159 AB385398:-159 AF132609:-159 KJ902051:-161 ENST00000440653.1:-302 uc064zav.1:-302 ENST00000443563.5:-337 uc064zau.1:-337 | |all_trans=ENST00000493923.1:38 uc064zax.1:38 ENST00000468949.1:-72 uc064zaw.1:-72 AK303012:-72 BC013737:-141 BT006649:-159 AB385398:-159 AF132609:-159 KJ902051:-161 ENST00000440653.1:-302 uc064zav.1:-302 ENST00000443563.5:-337 uc064zau.1:-337 | ||
|chr=chrX | |chr=chrX | ||
| Line 6: | Line 9: | ||
|distance_to_tss=198 | |distance_to_tss=198 | ||
|end=48802870 | |end=48802870 | ||
| + | |end_of_center_position=48802861 | ||
|entrez_id=10013 | |entrez_id=10013 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| − | |gene_alias=CPBHM | + | |gene_alias=CPBHM |
|gene_description=histone deacetylase 6 | |gene_description=histone deacetylase 6 | ||
|gene_id=10013 | |gene_id=10013 | ||
| Line 24: | Line 28: | ||
|species=human | |species=human | ||
|start=48802851 | |start=48802851 | ||
| + | |start_of_center_position=48802860 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000493923.1 uc064zax.1 | |transcript_name=ENST00000493923.1 uc064zax.1 | ||
Revision as of 20:48, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 48802860 |
|---|---|
| End of the center position in the TSS region: | 48802861 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000493923.1 uc064zax.1 |
|---|---|
| Distance: | 38 |
| Num_trans: | 14 |
| All_trans: | ENST00000493923.1:38 uc064zax.1:38 ENST00000468949.1:-72 uc064zaw.1:-72 AK303012:-72 BC013737:-141 BT006649:-159 AB385398:-159 AF132609:-159 KJ902051:-161 ENST00000440653.1:-302 uc064zav.1:-302 ENST00000443563.5:-337 uc064zau.1:-337 |
TATA-Box annotation
| Distance to TSS: | 198 |
|---|---|
| Nearest PromoterID: | NR_135591 |
| Entrez ID: | 10013 |
| Nearest Unigene: | Hs.6764 |
| Nearest Refseq: | NM_006044 |
| Nearest Ensembl: | ENSG00000094631 |
| Gene Name: | histone deacetylase 6 |
| Gene Alias: | CPBHM |
| Gene Description: | histone deacetylase 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
