Difference between revisions of "TSS:Mm 160804.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000045713.3:-33 NM_001081652:-34 uc007hyy.1:-34 BC072589:-34 AK046108:431 AB182283:455 |chr=chr11 |cpg_percent=0.015 |distance=-33 |distance_to...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=34 | |distance_to_tss=34 | ||
|end=6606020 | |end=6606020 | ||
| + | |end_of_center_position=6606020 | ||
|entrez_id=192950 | |entrez_id=192950 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| − | |gene_alias=D230024G13Rik | + | |gene_alias=D230024G13Rik |
|gene_description=NAC alpha domain containing | |gene_description=NAC alpha domain containing | ||
|gene_id=192950 | |gene_id=192950 | ||
| Line 17: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:3603030 | |hgnc_mgi_id=MGI:3603030 | ||
| + | |mKIAA0363= | ||
|nearest_ensembl=ENSMUSG00000041073 | |nearest_ensembl=ENSMUSG00000041073 | ||
|nearest_promoter_id=NM_001081652 | |nearest_promoter_id=NM_001081652 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=6606019 | |start=6606019 | ||
| + | |start_of_center_position=6606019 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000045713.3 | |transcript_name=ENSMUST00000045713.3 | ||
Revision as of 21:06, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 6606019 |
|---|---|
| End of the center position in the TSS region: | 6606020 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000045713.3 |
|---|---|
| Distance: | -33 |
| Num_trans: | 6 |
| All_trans: | ENSMUST00000045713.3:-33 NM_001081652:-34 uc007hyy.1:-34 BC072589:-34 AK046108:431 AB182283:455 |
TATA-Box annotation
| Distance to TSS: | 34 |
|---|---|
| Nearest PromoterID: | NM_001081652 |
| Entrez ID: | 192950 |
| Nearest Unigene: | Mm.337771 |
| Nearest Refseq: | NM_001081652 |
| Nearest Ensembl: | ENSMUSG00000041073 |
| Gene Name: | NAC alpha domain containing |
| Gene Alias: | D230024G13Rik |
| Gene Description: | NAC alpha domain containing |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
