Difference between revisions of "TSS:Mm 101144.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000109642.7:0 BC019129:0 BC019158:0 AK012644:3 ENSMUST00000138695.1:18 AK160390:26 AK012393:49 ENSMUST00000109641.1:81 ENSMUST00000109643.7:-29...") |
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|distance_to_tss=316 | |distance_to_tss=316 | ||
|end=16508187 | |end=16508187 | ||
| + | |end_of_center_position=16508169 | ||
|entrez_id=20335 | |entrez_id=20335 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=16508149 | |start=16508149 | ||
| + | |start_of_center_position=16508168 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000109642.7 BC019129 BC019158 | |transcript_name=ENSMUST00000109642.7 BC019129 BC019158 | ||
Revision as of 21:37, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 16508168 |
|---|---|
| End of the center position in the TSS region: | 16508169 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000109642.7 BC019129 BC019158 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENSMUST00000109642.7:0 BC019129:0 BC019158:0 AK012644:3 ENSMUST00000138695.1:18 AK160390:26 AK012393:49 ENSMUST00000109641.1:81 ENSMUST00000109643.7:-297 ENSMUST00000166950.7:-297 ENSMUST00000178855.7:-297 NM_001109972:-297 NM_001109971:-297 NM_011343:-297 uc007ibl.2:-297 uc007ibm.2:-297 uc011xrs.1:-297 |
TATA-Box annotation
| Distance to TSS: | 316 |
|---|---|
| Nearest PromoterID: | NM_011343 |
| Entrez ID: | 20335 |
| Nearest Unigene: | Mm.325350 |
| Nearest Refseq: | NM_011343 |
| Nearest Ensembl: | ENSMUSG00000078974 |
| Gene Name: | "SEC61, gamma subunit" |
| Gene Alias: | - |
| Gene Description: | "SEC61, gamma subunit" |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
