Difference between revisions of "TSS:Mm 101204.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |Evi8= | ||
|all_trans=ENSMUST00000144988.7:0 ENSMUST00000185131.7:11 NM_001193271:11 NM_010789:11 uc007icm.2:11 uc007icl.2:11 uc007icn.2:11 uc007ico.2:11 AK140748:11 AK134321:14 AK168684:19 ENSMUST00000068264.13:22 BC023689:22 ENSMUST00000125722.7:58 ENSMUST00000137300.1:58 AK049720:58 AK032947:58 AK132298:231 ENSMUST00000102878.10:266 ENSMUST00000177417.7:266 U33629:314 U33630:314 | |all_trans=ENSMUST00000144988.7:0 ENSMUST00000185131.7:11 NM_001193271:11 NM_010789:11 uc007icm.2:11 uc007icl.2:11 uc007icn.2:11 uc007ico.2:11 AK140748:11 AK134321:14 AK168684:19 ENSMUST00000068264.13:22 BC023689:22 ENSMUST00000125722.7:58 ENSMUST00000137300.1:58 AK049720:58 AK032947:58 AK132298:231 ENSMUST00000102878.10:266 ENSMUST00000177417.7:266 U33629:314 U33630:314 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-16 | |distance_to_tss=-16 | ||
|end=19018990 | |end=19018990 | ||
| + | |end_of_center_position=19018985 | ||
|entrez_id=17268 | |entrez_id=17268 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias=C530044H18Rik | + | |gene_alias=C530044H18Rik |
|gene_description=Meis homeobox 1 | |gene_description=Meis homeobox 1 | ||
|gene_id=17268 | |gene_id=17268 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=19018979 | |start=19018979 | ||
| + | |start_of_center_position=19018984 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000144988.7 | |transcript_name=ENSMUST00000144988.7 | ||
Revision as of 21:48, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 19018984 |
|---|---|
| End of the center position in the TSS region: | 19018985 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000144988.7 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | ENSMUST00000144988.7:0 ENSMUST00000185131.7:11 NM_001193271:11 NM_010789:11 uc007icm.2:11 uc007icl.2:11 uc007icn.2:11 uc007ico.2:11 AK140748:11 AK134321:14 AK168684:19 ENSMUST00000068264.13:22 BC023689:22 ENSMUST00000125722.7:58 ENSMUST00000137300.1:58 AK049720:58 AK032947:58 AK132298:231 ENSMUST00000102878.10:266 ENSMUST00000177417.7:266 U33629:314 U33630:314 |
TATA-Box annotation
| Distance to TSS: | -16 |
|---|---|
| Nearest PromoterID: | NM_010789 |
| Entrez ID: | 17268 |
| Nearest Unigene: | Mm.356578 |
| Nearest Refseq: | NM_010789 |
| Nearest Ensembl: | ENSMUSG00000020160 |
| Gene Name: | Meis homeobox 1 |
| Gene Alias: | C530044H18Rik |
| Gene Description: | Meis homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
