Difference between revisions of "TSS:Mm 101227.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK157663:-96 |chr=chr11 |cpg_percent=0.03 |distance=-96 |distance_to_tss=-40266 |end=20289693 |entrez_id=216543 |gc_percent=0.437811 |gene_alias=6030463...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AI481761= | ||
| + | |BC027174= | ||
| + | |Kiaa0582= | ||
|all_trans=AK157663:-96 | |all_trans=AK157663:-96 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-40266 | |distance_to_tss=-40266 | ||
|end=20289693 | |end=20289693 | ||
| + | |end_of_center_position=20289691 | ||
|entrez_id=216543 | |entrez_id=216543 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
| − | |gene_alias=6030463E10Rik | + | |gene_alias=6030463E10Rik |
|gene_description=centrosomal protein 68 | |gene_description=centrosomal protein 68 | ||
|gene_id=105180384 | |gene_id=105180384 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=20289687 | |start=20289687 | ||
| + | |start_of_center_position=20289690 | ||
|strand=- | |strand=- | ||
|tata_box="-34(AAGTATAAAAGA,-,0.00)" | |tata_box="-34(AAGTATAAAAGA,-,0.00)" | ||
Revision as of 21:53, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 20289690 |
|---|---|
| End of the center position in the TSS region: | 20289691 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK157663 |
|---|---|
| Distance: | -96 |
| Num_trans: | 1 |
| All_trans: | AK157663:-96 |
TATA-Box annotation
| Distance to TSS: | -40266 |
|---|---|
| Nearest PromoterID: | NM_172260 |
| Entrez ID: | 216543 |
| Nearest Unigene: | Mm.260314 |
| Nearest Refseq: | NM_172260 |
| Nearest Ensembl: | ENSMUSG00000044066 |
| Gene Name: | Riken cDNA F830230K02 gene |
| Gene Alias: | 6030463E10Rik |
| Gene Description: | centrosomal protein 68 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-34(AAGTATAAAAGA,-,0.00)" |
