Difference between revisions of "TSS:Hg 219978.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK296518:-38 CU689974:-96 DQ894501:-96 DQ891317:-96 AY732489:-96 KJ902153:-96 |chr=chr10 |cpg_percent=0.02 |distance=-38 |distance_to_tss=29995 |end=209...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |BS69= | ||
| + | |MRD30= | ||
|all_trans=AK296518:-38 CU689974:-96 DQ894501:-96 DQ891317:-96 AY732489:-96 KJ902153:-96 | |all_trans=AK296518:-38 CU689974:-96 DQ894501:-96 DQ891317:-96 AY732489:-96 KJ902153:-96 | ||
|chr=chr10 | |chr=chr10 | ||
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|distance_to_tss=29995 | |distance_to_tss=29995 | ||
|end=209989 | |end=209989 | ||
| + | |end_of_center_position=209989 | ||
|entrez_id=10771 | |entrez_id=10771 | ||
|gc_percent=0.412935 | |gc_percent=0.412935 | ||
| − | |gene_alias=BRAM1 | + | |gene_alias=BRAM1 |
|gene_description=zinc finger MYND-type containing 11 | |gene_description=zinc finger MYND-type containing 11 | ||
|gene_id=10771 | |gene_id=10771 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=209988 | |start=209988 | ||
| + | |start_of_center_position=209988 | ||
|strand=+ | |strand=+ | ||
|tata_box="-73(CCCTAAAGAGAC,+,0.00)" | |tata_box="-73(CCCTAAAGAGAC,+,0.00)" | ||
Revision as of 22:19, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 209988 |
|---|---|
| End of the center position in the TSS region: | 209989 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK296518 |
|---|---|
| Distance: | -38 |
| Num_trans: | 6 |
| All_trans: | AK296518:-38 CU689974:-96 DQ894501:-96 DQ891317:-96 AY732489:-96 KJ902153:-96 |
TATA-Box annotation
| Distance to TSS: | 29995 |
|---|---|
| Nearest PromoterID: | NM_001202468 |
| Entrez ID: | 10771 |
| Nearest Unigene: | Hs.292265 |
| Nearest Refseq: | NM_006624 |
| Nearest Ensembl: | ENSG00000015171 |
| Gene Name: | zinc finger MYND-type containing 11 |
| Gene Alias: | BRAM1 |
| Gene Description: | zinc finger MYND-type containing 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.412935 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-73(CCCTAAAGAGAC,+,0.00)" |
