Difference between revisions of "TSS:Hg 31999.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000443132.1:-27 uc061qao.1:-27 ENST00000586532.5:-46 uc061qac.1:-46 ENST00000625449.2:-78 uc061qal.1:-78 ENST00000627798.2:-125 uc061qak.1:-125 |c...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=-1005 | |distance_to_tss=-1005 | ||
|end=177314891 | |end=177314891 | ||
| + | |end_of_center_position=177314888 | ||
|entrez_id=102465255 | |entrez_id=102465255 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| − | |gene_alias=hsa- | + | |gene_alias=hsa-mir-6512 |
|gene_description=microRNA 6512 | |gene_description=microRNA 6512 | ||
|gene_id=100130691 | |gene_id=100130691 | ||
| Line 17: | Line 18: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id= | |hgnc_mgi_id= | ||
| + | |mir-6512= | ||
|nearest_ensembl=ENSG00000278418 | |nearest_ensembl=ENSG00000278418 | ||
|nearest_promoter_id=NR_106767 | |nearest_promoter_id=NR_106767 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=177314883 | |start=177314883 | ||
| + | |start_of_center_position=177314887 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000443132.1 uc061qao.1 | |transcript_name=ENST00000443132.1 uc061qao.1 | ||
Revision as of 22:22, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 177314887 |
|---|---|
| End of the center position in the TSS region: | 177314888 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000443132.1 uc061qao.1 |
|---|---|
| Distance: | -27 |
| Num_trans: | 8 |
| All_trans: | ENST00000443132.1:-27 uc061qao.1:-27 ENST00000586532.5:-46 uc061qac.1:-46 ENST00000625449.2:-78 uc061qal.1:-78 ENST00000627798.2:-125 uc061qak.1:-125 |
TATA-Box annotation
| Distance to TSS: | -1005 |
|---|---|
| Nearest PromoterID: | NR_106767 |
| Entrez ID: | 102465255 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_106767 |
| Nearest Ensembl: | ENSG00000278418 |
| Gene Name: | uncharacterized LOC100130691 |
| Gene Alias: | hsa-mir-6512 |
| Gene Description: | microRNA 6512 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
