Difference between revisions of "TSS:Mm 101378.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK172490:207 ENSMUST00000102864.4:230 NM_009044:230 uc007ifo.1:230 X15842:230 X60271:230 BC139770:288 BC139447:290 BC139448:290 AK031627:433 |chr=chr11...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=-235 | |distance_to_tss=-235 | ||
|end=23771210 | |end=23771210 | ||
| + | |end_of_center_position=23771205 | ||
|entrez_id=19696 | |entrez_id=19696 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| Line 19: | Line 20: | ||
|species=mouse | |species=mouse | ||
|start=23771199 | |start=23771199 | ||
| + | |start_of_center_position=23771204 | ||
|strand=- | |strand=- | ||
|transcript_name=AK172490 | |transcript_name=AK172490 | ||
Revision as of 22:25, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 23771204 |
|---|---|
| End of the center position in the TSS region: | 23771205 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK172490 |
|---|---|
| Distance: | 207 |
| Num_trans: | 10 |
| All_trans: | AK172490:207 ENSMUST00000102864.4:230 NM_009044:230 uc007ifo.1:230 X15842:230 X60271:230 BC139770:288 BC139447:290 BC139448:290 AK031627:433 |
TATA-Box annotation
| Distance to TSS: | -235 |
|---|---|
| Nearest PromoterID: | NM_009044 |
| Entrez ID: | 19696 |
| Nearest Unigene: | Mm.4869 |
| Nearest Refseq: | NM_009044 |
| Nearest Ensembl: | ENSMUSG00000020275 |
| Gene Name: | Rel |
| Gene Alias: | c-Rel |
| Gene Description: | reticuloendotheliosis oncogene |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
