Difference between revisions of "TSS:Mm 168400.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000143418.1:1 ENSMUST00000150739.1:10 AK018706:31 ENSMUST00000102844.3:32 BC002108:42 BC081446:146 BC096392:146 NM_024277:-148 NM_001033865:-14...") |
|||
| Line 6: | Line 6: | ||
|distance_to_tss=-58 | |distance_to_tss=-58 | ||
|end=29547892 | |end=29547892 | ||
| + | |end_of_center_position=29547892 | ||
|entrez_id=73324 | |entrez_id=73324 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=29547891 | |start=29547891 | ||
| + | |start_of_center_position=29547891 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000143418.1 | |transcript_name=ENSMUST00000143418.1 | ||
Revision as of 22:37, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 29547891 |
|---|---|
| End of the center position in the TSS region: | 29547892 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000143418.1 |
|---|---|
| Distance: | 1 |
| Num_trans: | 12 |
| All_trans: | ENSMUST00000143418.1:1 ENSMUST00000150739.1:10 AK018706:31 ENSMUST00000102844.3:32 BC002108:42 BC081446:146 BC096392:146 NM_024277:-148 NM_001033865:-148 uc007ihg.1:-148 uc007ihh.1:-148 ENSMUST00000102845.10:-217 |
TATA-Box annotation
| Distance to TSS: | -58 |
|---|---|
| Nearest PromoterID: | NM_028504 |
| Entrez ID: | 73324 |
| Nearest Unigene: | Mm.69388 |
| Nearest Refseq: | NM_028504 |
| Nearest Ensembl: | ENSMUSG00000020461 |
| Gene Name: | ribosomal protein S27A |
| Gene Alias: | 1700034F02Rik |
| Gene Description: | clathrin heavy chain linker domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
