Difference between revisions of "TSS:Mm 101426.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.005 |distance= |distance_to_tss=24351 |end=29742916 |entrez_id=68585 |gc_percent=0.338308 |gene_alias=1110020G17Rik|AA407876|AA409940|AA9...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |AA407876= | ||
| + | |AA409940= | ||
| + | |AA960376= | ||
| + | |ASY= | ||
| + | |C130026I10Rik= | ||
| + | |NOGO= | ||
| + | |NSP-CL= | ||
| + | |NgA= | ||
| + | |Nogo-A= | ||
| + | |Nogo-B= | ||
| + | |Nogo-C= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 5: | Line 16: | ||
|distance_to_tss=24351 | |distance_to_tss=24351 | ||
|end=29742916 | |end=29742916 | ||
| + | |end_of_center_position=29742915 | ||
|entrez_id=68585 | |entrez_id=68585 | ||
|gc_percent=0.338308 | |gc_percent=0.338308 | ||
| − | |gene_alias=1110020G17Rik | + | |gene_alias=1110020G17Rik |
|gene_description=reticulon 4 | |gene_description=reticulon 4 | ||
|gene_name=Rtn4 | |gene_name=Rtn4 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |mKIAA0886= | ||
| + | |mKIAA4153= | ||
|nearest_ensembl=ENSMUSG00000020458 | |nearest_ensembl=ENSMUSG00000020458 | ||
|nearest_promoter_id=NM_024226 | |nearest_promoter_id=NM_024226 | ||
| Line 18: | Line 32: | ||
|species=mouse | |species=mouse | ||
|start=29742912 | |start=29742912 | ||
| + | |start_of_center_position=29742914 | ||
|strand=- | |strand=- | ||
|tata_box="-95(CTTTCTAAAAGC,-,0.00)" | |tata_box="-95(CTTTCTAAAAGC,-,0.00)" | ||
Revision as of 22:40, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 29742914 |
|---|---|
| End of the center position in the TSS region: | 29742915 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 24351 |
|---|---|
| Nearest PromoterID: | NM_024226 |
| Entrez ID: | 68585 |
| Nearest Unigene: | Mm.192580 |
| Nearest Refseq: | NM_024226 |
| Nearest Ensembl: | ENSMUSG00000020458 |
| Gene Name: | Rtn4 |
| Gene Alias: | 1110020G17Rik |
| Gene Description: | reticulon 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.338308 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-95(CTTTCTAAAAGC,-,0.00)" |
