Difference between revisions of "TSS:Mm 101565.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.01 |distance= |distance_to_tss=56536 |end=34103743 |entrez_id=16822 |gc_percent=0.467662 |gene_alias=AI323664|BB161688|SLP-76|SLP76|m1Kho...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |BB161688= | ||
| + | |SLP-76= | ||
| + | |SLP76= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 5: | Line 8: | ||
|distance_to_tss=56536 | |distance_to_tss=56536 | ||
|end=34103743 | |end=34103743 | ||
| + | |end_of_center_position=34103737 | ||
|entrez_id=16822 | |entrez_id=16822 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| − | |gene_alias=AI323664 | + | |gene_alias=AI323664 |
|gene_description=lymphocyte cytosolic protein 2 | |gene_description=lymphocyte cytosolic protein 2 | ||
|gene_name=Lcp2 | |gene_name=Lcp2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |m1Khoe= | ||
|nearest_ensembl=ENSMUSG00000002699 | |nearest_ensembl=ENSMUSG00000002699 | ||
|nearest_promoter_id=NM_010696 | |nearest_promoter_id=NM_010696 | ||
| Line 18: | Line 23: | ||
|species=mouse | |species=mouse | ||
|start=34103730 | |start=34103730 | ||
| + | |start_of_center_position=34103736 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
| Line 23: | Line 29: | ||
|tss_id=mm_101565.1 | |tss_id=mm_101565.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |twm= | ||
}} | }} | ||
Revision as of 23:07, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 34103736 |
|---|---|
| End of the center position in the TSS region: | 34103737 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 56536 |
|---|---|
| Nearest PromoterID: | NM_010696 |
| Entrez ID: | 16822 |
| Nearest Unigene: | Mm.265350 |
| Nearest Refseq: | NM_010696 |
| Nearest Ensembl: | ENSMUSG00000002699 |
| Gene Name: | Lcp2 |
| Gene Alias: | AI323664 |
| Gene Description: | lymphocyte cytosolic protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
