Difference between revisions of "TSS:Hg 224208.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000449648.1:-17 uc057rnl.1:-17 ENST00000414894.1:-20 uc057rnk.1:-20 ENST00000607982.5:105 ENST00000608526.5:105 ENST00000623015.3:105 ENST00000615...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=-3052 | |distance_to_tss=-3052 | ||
|end=6583700 | |end=6583700 | ||
| + | |end_of_center_position=6583698 | ||
|entrez_id=5588 | |entrez_id=5588 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=PRKCT | + | |gene_alias=PRKCT |
|gene_description=protein kinase C theta | |gene_description=protein kinase C theta | ||
|gene_id= | |gene_id= | ||
| Line 17: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:44689 | |hgnc_mgi_id=HGNC:44689 | ||
| + | |nPKC-theta= | ||
|nearest_ensembl=ENSG00000065675 | |nearest_ensembl=ENSG00000065675 | ||
|nearest_promoter_id=NM_001323265 | |nearest_promoter_id=NM_001323265 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=6583695 | |start=6583695 | ||
| + | |start_of_center_position=6583697 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000449648.1 uc057rnl.1 | |transcript_name=ENST00000449648.1 uc057rnl.1 | ||
Revision as of 23:21, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 6583697 |
|---|---|
| End of the center position in the TSS region: | 6583698 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000449648.1 uc057rnl.1 |
|---|---|
| Distance: | -17 |
| Num_trans: | 24 |
| All_trans: | ENST00000449648.1:-17 uc057rnl.1:-17 ENST00000414894.1:-20 uc057rnk.1:-20 ENST00000607982.5:105 ENST00000608526.5:105 ENST00000623015.3:105 ENST00000615210.4:105 ENST00000613985.4:105 uc057rnm.1:105 uc057rnn.1:105 uc057rno.1:105 uc057rnp.1:105 uc057rnq.1:105 ENST00000625102.3:111 uc057rnr.1:111 ENST00000624974.3:131 ENST00000623160.3:131 ENST00000624678.3:131 uc057rns.1:131 uc057rnt.1:131 uc057rnu.1:131 ENST00000625147.3:161 uc057rnv.1:161 |
TATA-Box annotation
| Distance to TSS: | -3052 |
|---|---|
| Nearest PromoterID: | NM_001323265 |
| Entrez ID: | 5588 |
| Nearest Unigene: | Hs.498570 |
| Nearest Refseq: | NM_006257 |
| Nearest Ensembl: | ENSG00000065675 |
| Gene Name: | PRKCQ antisense RNA 1 |
| Gene Alias: | PRKCT |
| Gene Description: | protein kinase C theta |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
