Difference between revisions of "TSS:Hg 196967.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000452188.5:0 ENST00000455331.5:0 ENST00000442270.5:0 uc065aht.1:0 uc065ahu.1:0 uc065ahv.1:0 AK292543:0 AK126987:0 AK096955:0 AK125041:0 ENST00000...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GASP4= | ||
|all_trans=ENST00000452188.5:0 ENST00000455331.5:0 ENST00000442270.5:0 uc065aht.1:0 uc065ahu.1:0 uc065ahv.1:0 AK292543:0 AK126987:0 AK096955:0 AK125041:0 ENST00000354842.4:13 uc065ahw.1:13 BC032236:13 ENST00000445416.5:-161 NR_045862:-161 NR_045864:-161 NR_045863:-161 NR_045861:-161 uc065ahs.1:-161 BC036206:-161 | |all_trans=ENST00000452188.5:0 ENST00000455331.5:0 ENST00000442270.5:0 uc065aht.1:0 uc065ahu.1:0 uc065ahv.1:0 AK292543:0 AK126987:0 AK096955:0 AK125041:0 ENST00000354842.4:13 uc065ahw.1:13 BC032236:13 ENST00000445416.5:-161 NR_045862:-161 NR_045864:-161 NR_045863:-161 NR_045861:-161 uc065ahs.1:-161 BC036206:-161 | ||
|chr=chrX | |chr=chrX | ||
| Line 6: | Line 7: | ||
|distance_to_tss=184 | |distance_to_tss=184 | ||
|end=101485462 | |end=101485462 | ||
| + | |end_of_center_position=101485439 | ||
|entrez_id=100131755 | |entrez_id=100131755 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=CXorf35 | + | |gene_alias=CXorf35 |
|gene_description="armadillo repeat containing, X-linked 4" | |gene_description="armadillo repeat containing, X-linked 4" | ||
|gene_id=100131755 | |gene_id=100131755 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=101485414 | |start=101485414 | ||
| + | |start_of_center_position=101485438 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000452188.5 ENST00000455331.5 ENST00000442270.5 uc065aht.1 uc065ahu.1 uc065ahv.1 AK292543 AK126987 AK096955 AK125041 | |transcript_name=ENST00000452188.5 ENST00000455331.5 ENST00000442270.5 uc065aht.1 uc065ahu.1 uc065ahv.1 AK292543 AK126987 AK096955 AK125041 | ||
Revision as of 23:26, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 101485438 |
|---|---|
| End of the center position in the TSS region: | 101485439 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000452188.5 ENST00000455331.5 ENST00000442270.5 uc065aht.1 uc065ahu.1 uc065ahv.1 AK292543 AK126987 AK096955 AK125041 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000452188.5:0 ENST00000455331.5:0 ENST00000442270.5:0 uc065aht.1:0 uc065ahu.1:0 uc065ahv.1:0 AK292543:0 AK126987:0 AK096955:0 AK125041:0 ENST00000354842.4:13 uc065ahw.1:13 BC032236:13 ENST00000445416.5:-161 NR_045862:-161 NR_045864:-161 NR_045863:-161 NR_045861:-161 uc065ahs.1:-161 BC036206:-161 |
TATA-Box annotation
| Distance to TSS: | 184 |
|---|---|
| Nearest PromoterID: | NR_045863 |
| Entrez ID: | 100131755 |
| Nearest Unigene: | Hs.729062 |
| Nearest Refseq: | NM_152583 |
| Nearest Ensembl: | ENSG00000196440 |
| Gene Name: | "armadillo repeat containing, X-linked 4" |
| Gene Alias: | CXorf35 |
| Gene Description: | "armadillo repeat containing, X-linked 4" |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
