Difference between revisions of "TSS:Hg 103861.1"
From referenceTSS
| Line 12: | Line 12: | ||
|distance_to_tss=99 | |distance_to_tss=99 | ||
|end=11165132 | |end=11165132 | ||
| + | |end_of_center_position=11165129 | ||
|entrez_id=10659 | |entrez_id=10659 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=BRUNOL3 | + | |gene_alias=BRUNOL3 |
|gene_description="CUGBP, Elav-like family member 2" | |gene_description="CUGBP, Elav-like family member 2" | ||
|gene_id=10659 | |gene_id=10659 | ||
| Line 30: | Line 31: | ||
|species=human | |species=human | ||
|start=11165125 | |start=11165125 | ||
| + | |start_of_center_position=11165128 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000608830.5 uc031vxe.2 AK293164 | |transcript_name=ENST00000608830.5 uc031vxe.2 AK293164 | ||
Revision as of 23:42, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 11165128 |
|---|---|
| End of the center position in the TSS region: | 11165129 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000608830.5 uc031vxe.2 AK293164 |
|---|---|
| Distance: | 8 |
| Num_trans: | 25 |
| All_trans: | ENST00000608830.5:8 uc031vxe.2:8 AK293164:8 AF036956:-12 AK299992:-29 AK297313:-35 AF432906:46 ENST00000399850.7:-96 ENST00000417956.6:-96 NM_001025076:-96 NM_001083591:-96 uc057rqu.1:-96 uc031vxf.2:-96 AK316354:146 AK299983:-160 AK304216:324 ENST00000609870.5:352 ENST00000609692.5:352 uc057rqv.1:352 uc057rqw.1:352 AK310038:352 AK302681:352 ENST00000354897.3:354 uc057rqx.1:354 AK295511:396 |
TATA-Box annotation
| Distance to TSS: | 99 |
|---|---|
| Nearest PromoterID: | NM_001083591 |
| Entrez ID: | 10659 |
| Nearest Unigene: | Hs.309288 |
| Nearest Refseq: | NM_006561 |
| Nearest Ensembl: | ENSG00000048740 |
| Gene Name: | "CUGBP, Elav-like family member 2" |
| Gene Alias: | BRUNOL3 |
| Gene Description: | "CUGBP, Elav-like family member 2" |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
