Difference between revisions of "TSS:Hg 103863.1"
From referenceTSS
| Line 12: | Line 12: | ||
|distance_to_tss=173 | |distance_to_tss=173 | ||
|end=11165212 | |end=11165212 | ||
| + | |end_of_center_position=11165204 | ||
|entrez_id=10659 | |entrez_id=10659 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=BRUNOL3 | + | |gene_alias=BRUNOL3 |
|gene_description="CUGBP, Elav-like family member 2" | |gene_description="CUGBP, Elav-like family member 2" | ||
|gene_id=10659 | |gene_id=10659 | ||
| Line 30: | Line 31: | ||
|species=human | |species=human | ||
|start=11165194 | |start=11165194 | ||
| + | |start_of_center_position=11165203 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AF432906 | |transcript_name=AF432906 | ||
Revision as of 23:43, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 11165203 |
|---|---|
| End of the center position in the TSS region: | 11165204 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AF432906 |
|---|---|
| Distance: | -17 |
| Num_trans: | 25 |
| All_trans: | AF432906:-17 ENST00000608830.5:-55 uc031vxe.2:-55 AK293164:-55 AK316354:66 AF036956:-81 AK299992:-98 AK297313:-104 ENST00000399850.7:-165 ENST00000417956.6:-165 NM_001025076:-165 NM_001083591:-165 uc057rqu.1:-165 uc031vxf.2:-165 AK299983:-229 AK304216:244 ENST00000609870.5:272 ENST00000609692.5:272 uc057rqv.1:272 uc057rqw.1:272 AK310038:272 AK302681:272 ENST00000354897.3:274 uc057rqx.1:274 AK295511:316 |
TATA-Box annotation
| Distance to TSS: | 173 |
|---|---|
| Nearest PromoterID: | NM_001083591 |
| Entrez ID: | 10659 |
| Nearest Unigene: | Hs.309288 |
| Nearest Refseq: | NM_006561 |
| Nearest Ensembl: | ENSG00000048740 |
| Gene Name: | "CUGBP, Elav-like family member 2" |
| Gene Alias: | BRUNOL3 |
| Gene Description: | "CUGBP, Elav-like family member 2" |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
