Difference between revisions of "TSS:Hg 103868.1"
From referenceTSS
| Line 12: | Line 12: | ||
|distance_to_tss=454 | |distance_to_tss=454 | ||
|end=11165492 | |end=11165492 | ||
| + | |end_of_center_position=11165484 | ||
|entrez_id=10659 | |entrez_id=10659 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias=BRUNOL3 | + | |gene_alias=BRUNOL3 |
|gene_description="CUGBP, Elav-like family member 2" | |gene_description="CUGBP, Elav-like family member 2" | ||
|gene_id=10659 | |gene_id=10659 | ||
| Line 30: | Line 31: | ||
|species=human | |species=human | ||
|start=11165475 | |start=11165475 | ||
| + | |start_of_center_position=11165483 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000609870.5 ENST00000609692.5 ENST00000354897.3 uc057rqv.1 uc057rqw.1 uc057rqx.1 AK310038 AK302681 | |transcript_name=ENST00000609870.5 ENST00000609692.5 ENST00000354897.3 uc057rqv.1 uc057rqw.1 uc057rqx.1 AK310038 AK302681 | ||
Revision as of 23:43, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 11165483 |
|---|---|
| End of the center position in the TSS region: | 11165484 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000609870.5 ENST00000609692.5 ENST00000354897.3 uc057rqv.1 uc057rqw.1 uc057rqx.1 AK310038 AK302681 |
|---|---|
| Distance: | 0 |
| Num_trans: | 24 |
| All_trans: | ENST00000609870.5:0 ENST00000609692.5:0 ENST00000354897.3:0 uc057rqv.1:0 uc057rqw.1:0 uc057rqx.1:0 AK310038:0 AK302681:0 AK304216:-20 AK295511:36 AK316354:-198 AF432906:-298 ENST00000608830.5:-336 uc031vxe.2:-336 AK293164:-336 AF036956:-362 AK299992:-379 AK297313:-385 ENST00000399850.7:-446 ENST00000417956.6:-446 NM_001025076:-446 NM_001083591:-446 uc057rqu.1:-446 uc031vxf.2:-446 |
TATA-Box annotation
| Distance to TSS: | 454 |
|---|---|
| Nearest PromoterID: | NM_001083591 |
| Entrez ID: | 10659 |
| Nearest Unigene: | Hs.309288 |
| Nearest Refseq: | NM_006561 |
| Nearest Ensembl: | ENSG00000048740 |
| Gene Name: | "CUGBP, Elav-like family member 2" |
| Gene Alias: | BRUNOL3 |
| Gene Description: | "CUGBP, Elav-like family member 2" |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
