Difference between revisions of "TSS:Hg 104212.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=128 | |distance_to_tss=128 | ||
|end=21534311 | |end=21534311 | ||
| + | |end_of_center_position=21534301 | ||
|entrez_id=8028 | |entrez_id=8028 | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=21534289 | |start=21534289 | ||
| + | |start_of_center_position=21534300 | ||
|strand=+ | |strand=+ | ||
|transcript_name=U13948 | |transcript_name=U13948 | ||
Revision as of 00:54, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 21534300 |
|---|---|
| End of the center position in the TSS region: | 21534301 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | U13948 |
|---|---|
| Distance: | 27 |
| Num_trans: | 50 |
| All_trans: | U13948:27 ENST00000307729.11:32 uc001iqt.4:32 BC065376:32 BC080577:32 ENST00000377091.6:34 uc001iqr.3:34 ENST00000377072.7:-117 uc001iqs.4:-117 NM_001195630:-118 NM_001195628:-118 NM_004641:-118 NM_001195627:-118 ENST00000377100.7:-125 uc001iqq.3:-125 BC032532:-125 AB209755:155 ENST00000471315.5:157 uc057sdv.1:157 BC052798:163 BC094844:166 BC129946:168 ENST00000495130.5:179 uc057sdw.1:179 ENST00000621220.4:334 ENST00000377059.7:334 NM_001195626:334 uc057sdx.1:334 uc021pny.2:334 CU687346:334 BC156206:334 BC156949:334 AY598745:334 KJ892460:334 ENST00000476557.5:391 uc057sdy.1:391 ENST00000430455.1:438 ENST00000462999.5:438 ENST00000480415.5:438 ENST00000479634.1:438 uc057sdz.1:438 uc009xkf.2:438 uc009xke.2:438 uc001iqx.2:438 AF060927:438 AF060934:438 AF060935:438 AF060936:438 AF060937:438 AF060938:438 |
TATA-Box annotation
| Distance to TSS: | 128 |
|---|---|
| Nearest PromoterID: | NR_136736 |
| Entrez ID: | 8028 |
| Nearest Unigene: | Hs.30385 |
| Nearest Refseq: | NM_004641 |
| Nearest Ensembl: | ENSG00000078403 |
| Gene Name: | "myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10" |
| Gene Alias: | AF10 |
| Gene Description: | "myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10" |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
