Difference between revisions of "TSS:Hg 104235.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=90 | |distance_to_tss=90 | ||
|end=22316479 | |end=22316479 | ||
| + | |end_of_center_position=22316474 | ||
|entrez_id=100532731 | |entrez_id=100532731 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=22316467 | |start=22316467 | ||
| + | |start_of_center_position=22316473 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000417470.1 uc057sfb.1 | |transcript_name=ENST00000417470.1 uc057sfb.1 | ||
Revision as of 00:58, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 22316473 |
|---|---|
| End of the center position in the TSS region: | 22316474 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000417470.1 uc057sfb.1 |
|---|---|
| Distance: | -16 |
| Num_trans: | 45 |
| All_trans: | ENST00000417470.1:-16 uc057sfb.1:-16 ENST00000448361.5:-23 uc057sfa.1:-23 ENST00000463688.6:-27 uc057sez.1:-27 ENST00000463409.6:-36 uc057sey.1:-36 ENST00000489125.2:-37 uc057sex.1:-37 ENST00000496071.5:-39 uc057sew.1:-39 ENST00000472610.5:-40 uc057sev.1:-40 ENST00000444869.5:-48 uc057seu.1:-48 AY542159:-50 ENST00000456711.5:-51 uc057set.1:-51 ENST00000470045.1:-53 uc057ses.1:-53 AK295109:-53 KJ893368:-54 ENST00000479958.6:-59 ENST00000602390.5:-59 uc057ser.1:-59 uc009xkg.4:-59 AF078848:-59 AK128789:-59 AK313235:-59 ENST00000468179.6:-69 uc057seq.1:-69 BC022898:-72 AF201948:-79 ENST00000475460.6:-80 uc057sep.1:-80 ENST00000602574.5:-82 uc057seo.1:-82 BX647275:-82 NM_012071:-85 NM_001204062:-85 ENST00000468469.5:256 uc057sfc.1:256 ENST00000376836.7:-494 uc001irf.4:-494 |
TATA-Box annotation
| Distance to TSS: | 90 |
|---|---|
| Nearest PromoterID: | NM_001204062 |
| Entrez ID: | 100532731 |
| Nearest Unigene: | Hs.380403 |
| Nearest Refseq: | NM_001204062 |
| Nearest Ensembl: | ENSG00000269897 |
| Gene Name: | COMMD3-BMI1 readthrough |
| Gene Alias: | - |
| Gene Description: | COMMD3-BMI1 readthrough |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
