Difference between revisions of "TSS:Hg 104237.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=797 | |distance_to_tss=797 | ||
|end=22317185 | |end=22317185 | ||
| + | |end_of_center_position=22317181 | ||
|entrez_id=100532731 | |entrez_id=100532731 | ||
|gc_percent=0.383085 | |gc_percent=0.383085 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=22317175 | |start=22317175 | ||
| + | |start_of_center_position=22317180 | ||
|strand=+ | |strand=+ | ||
|tata_box="-31(TCTTTTAAGCGA,+,0.00),44(GCTTTTAGATGA,+,0.00)" | |tata_box="-31(TCTTTTAAGCGA,+,0.00),44(GCTTTTAGATGA,+,0.00)" | ||
Revision as of 00:58, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 22317180 |
|---|---|
| End of the center position in the TSS region: | 22317181 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000472673.5 uc057sfd.1 |
|---|---|
| Distance: | 309 |
| Num_trans: | 4 |
| All_trans: | ENST00000472673.5:309 uc057sfd.1:309 ENST00000468469.5:-441 uc057sfc.1:-441 |
TATA-Box annotation
| Distance to TSS: | 797 |
|---|---|
| Nearest PromoterID: | NM_001204062 |
| Entrez ID: | 100532731 |
| Nearest Unigene: | Hs.380403 |
| Nearest Refseq: | NM_001204062 |
| Nearest Ensembl: | ENSG00000269897 |
| Gene Name: | COMM domain containing 3 |
| Gene Alias: | - |
| Gene Description: | COMMD3-BMI1 readthrough |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.383085 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-31(TCTTTTAAGCGA,+,0.00),44(GCTTTTAGATGA,+,0.00)" |
