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Difference between revisions of "TSS:Hg 104251.1"

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Line 8: Line 8:
 
|distance_to_tss=4429
 
|distance_to_tss=4429
 
|end=22325659
 
|end=22325659
 +
|end_of_center_position=22325639
 
|entrez_id=648
 
|entrez_id=648
 
|flvi-2/bmi-1=
 
|flvi-2/bmi-1=
 
|gc_percent=0.835821
 
|gc_percent=0.835821
|gene_alias=FLVI2/BMI1|PCGF4|RNF51|flvi-2/bmi-1
+
|gene_alias=FLVI2/BMI1
 
|gene_description="BMI1 proto-oncogene, polycomb ring finger"
 
|gene_description="BMI1 proto-oncogene, polycomb ring finger"
 
|gene_id=100532731 648
 
|gene_id=100532731 648
Line 27: Line 28:
 
|species=human
 
|species=human
 
|start=22325618
 
|start=22325618
 +
|start_of_center_position=22325638
 
|strand=+
 
|strand=+
 
|transcript_name=ENST00000416820.5 uc057sfk.1
 
|transcript_name=ENST00000416820.5 uc057sfk.1

Revision as of 01:00, 12 May 2019

Basic information about the TSS


TSS ID:hg_104251.1
Species:human
Chr:chr10
TSS Classification:yes
Start:22325618
End:22325659
Strand:+
TSS Score:1
Start of the center position in the TSS region:22325638
End of the center position in the TSS region:22325639



Gene and protein annotation


Transcript_name:ENST00000416820.5 uc057sfk.1
Distance:0
GeneID:100532731 648
HGNC/MGI_ID:HGNC:1066 HGNC:48326
UniProt_ID:Q5T8Z6
Gene_name:"BMI1 proto-oncogene, polycomb ring finger; COMMD3-BMI1 readthrough"
Gene_symbol:BMI1 COMMD3-BMI1
Gene_synonyms:RNF51
Gene_source:HGNC:1066 HGNC:48326



Transcript annotation


Transcript_name:ENST00000416820.5 uc057sfk.1
Distance:0
Num_trans:6
All_trans:ENST00000416820.5:0 uc057sfk.1:0 ENST00000602358.5:11 uc057sfl.1:11 ENST00000602524.1:274 uc057sfm.1:274



TATA-Box annotation


Distance to TSS:4429
Nearest PromoterID:NM_005180
Entrez ID:648
Nearest Unigene:Hs.380403
Nearest Refseq:NM_005180
Nearest Ensembl:ENSG00000168283
Gene Name:"BMI1 proto-oncogene, polycomb ring finger; COMMD3-BMI1 readthrough"
Gene Alias:FLVI2/BMI1
Gene Description:"BMI1 proto-oncogene, polycomb ring finger"
Gene Type:protein-coding
CpG%:0.17
GC%:0.835821
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):