Difference between revisions of "TSS:Hg 104380.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=38 | |distance_to_tss=38 | ||
|end=25651771 | |end=25651771 | ||
| + | |end_of_center_position=25651751 | ||
|entrez_id=101929052 | |entrez_id=101929052 | ||
|gc_percent=0.373134 | |gc_percent=0.373134 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=25651729 | |start=25651729 | ||
| + | |start_of_center_position=25651750 | ||
|strand=+ | |strand=+ | ||
|tata_box="-26(GCTTTTATGCTG,+,0.00)" | |tata_box="-26(GCTTTTATGCTG,+,0.00)" | ||
Revision as of 01:20, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 25651750 |
|---|---|
| End of the center position in the TSS region: | 25651751 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000628907.2 ENST00000625325.2 uc057sie.1 uc031wad.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | ENST00000628907.2:0 ENST00000625325.2:0 uc057sie.1:0 uc031wad.2:0 ENST00000628620.1:4 uc031wac.2:4 ENST00000626230.2:-18 NR_108069:-18 NR_108067:-18 NR_108068:-18 uc001isl.1:-18 AK123440:-18 |
TATA-Box annotation
| Distance to TSS: | 38 |
|---|---|
| Nearest PromoterID: | NR_108067 |
| Entrez ID: | 101929052 |
| Nearest Unigene: | Hs.128298 |
| Nearest Refseq: | NR_108067 |
| Nearest Ensembl: | ENSG00000280809 |
| Gene Name: | long intergenic non-protein coding RNA 836 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 836 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.373134 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-26(GCTTTTATGCTG,+,0.00)" |
