Difference between revisions of "TSS:Hg 104392.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=186 | |distance_to_tss=186 | ||
|end=26216528 | |end=26216528 | ||
| + | |end_of_center_position=26216494 | ||
|entrez_id=2572 | |entrez_id=2572 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=26216458 | |start=26216458 | ||
| + | |start_of_center_position=26216493 | ||
|strand=+ | |strand=+ | ||
|tata_box="65(CTCTTTTAAAGC,-,0.00),66(TCTTTTAAAGCT,+,0.00)" | |tata_box="65(CTCTTTTAAAGC,-,0.00),66(TCTTTTAAAGCT,+,0.00)" | ||
Revision as of 01:21, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 26216493 |
|---|---|
| End of the center position in the TSS region: | 26216494 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC047899 BC039038 |
|---|---|
| Distance: | 0 |
| Num_trans: | 18 |
| All_trans: | BC047899:0 BC039038:0 ENST00000259271.7:137 uc001isq.3:137 M74826:137 ENST00000376261.7:-152 NM_001134366:-152 NM_000818:-152 uc001isp.3:-152 ENST00000428517.2:205 uc009xkr.5:205 BC029517:205 M81882:230 BC126327:257 BC126329:257 AB527954:282 HQ258311:282 X69936:297 |
TATA-Box annotation
| Distance to TSS: | 186 |
|---|---|
| Nearest PromoterID: | NM_001134366 |
| Entrez ID: | 2572 |
| Nearest Unigene: | Hs.231829 |
| Nearest Refseq: | NM_000818 |
| Nearest Ensembl: | ENSG00000136750 |
| Gene Name: | glutamate decarboxylase 2 |
| Gene Alias: | GAD65 |
| Gene Description: | glutamate decarboxylase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "65(CTCTTTTAAAGC,-,0.00),66(TCTTTTAAAGCT,+,0.00)" |
