Difference between revisions of "TSS:Hg 104510.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=69 | |distance_to_tss=69 | ||
|end=28743722 | |end=28743722 | ||
| + | |end_of_center_position=28743719 | ||
|entrez_id=101929218 | |entrez_id=101929218 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| Line 19: | Line 20: | ||
|species=human | |species=human | ||
|start=28743715 | |start=28743715 | ||
| + | |start_of_center_position=28743718 | ||
|strand=+ | |strand=+ | ||
|tata_box="-17(CCCTCTTAGAGG,-,0.00),-16(CCTCTTAGAGGT,+,0.00)" | |tata_box="-17(CCCTCTTAGAGG,-,0.00),-16(CCTCTTAGAGGT,+,0.00)" | ||
Revision as of 01:42, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 28743718 |
|---|---|
| End of the center position in the TSS region: | 28743719 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK058127 |
|---|---|
| Distance: | 13 |
| Num_trans: | 4 |
| All_trans: | AK058127:13 ENST00000456082.1:23 uc057sma.1:23 NR_120652:-66 |
TATA-Box annotation
| Distance to TSS: | 69 |
|---|---|
| Nearest PromoterID: | NR_120652 |
| Entrez ID: | 101929218 |
| Nearest Unigene: | Hs.224866 |
| Nearest Refseq: | NR_120652 |
| Nearest Ensembl: | |
| Gene Name: | LINC01517 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 1517 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-17(CCCTCTTAGAGG,-,0.00),-16(CCTCTTAGAGGT,+,0.00)" |
