Personal tools

Difference between revisions of "TSS:Hg 104547.1"

From referenceTSS

Jump to: navigation, search
Line 13: Line 13:
 
|distance_to_tss=51
 
|distance_to_tss=51
 
|end=30434698
 
|end=30434698
 +
|end_of_center_position=30434687
 
|entrez_id=1326
 
|entrez_id=1326
 
|gc_percent=0.726368
 
|gc_percent=0.726368
|gene_alias=AURA2|COT|EST|ESTF|MEKK8|TPL2|Tpl-2|c-COT
+
|gene_alias=AURA2
 
|gene_description=mitogen-activated protein kinase kinase kinase 8
 
|gene_description=mitogen-activated protein kinase kinase kinase 8
 
|gene_id=1326
 
|gene_id=1326
Line 31: Line 32:
 
|species=human
 
|species=human
 
|start=30434674
 
|start=30434674
 +
|start_of_center_position=30434686
 
|strand=+
 
|strand=+
 
|transcript_name=ENST00000413724.5 uc057snn.1
 
|transcript_name=ENST00000413724.5 uc057snn.1

Revision as of 01:52, 12 May 2019

Basic information about the TSS


TSS ID:hg_104547.1
Species:human
Chr:chr10
TSS Classification:yes
Start:30434674
End:30434698
Strand:+
TSS Score:1
Start of the center position in the TSS region:30434686
End of the center position in the TSS region:30434687



Gene and protein annotation


Transcript_name:ENST00000413724.5 uc057snn.1
Distance:-10
GeneID:1326
HGNC/MGI_ID:HGNC:6860
UniProt_ID:Q5T853
Gene_name:mitogen-activated protein kinase kinase kinase 8
Gene_symbol:MAP3K8
Gene_synonyms:EST MEKK8 Tpl-2 c-COT
Gene_source:HGNC:6860



Transcript annotation


Transcript_name:ENST00000413724.5 uc057snn.1
Distance:-10
Num_trans:5
All_trans:ENST00000413724.5:-10 uc057snn.1:-10 D14497:-411 ENST00000375322.2:-431 uc057snm.1:-431



TATA-Box annotation


Distance to TSS:51
Nearest PromoterID:NM_001320961
Entrez ID:1326
Nearest Unigene:Hs.432453
Nearest Refseq:NM_005204
Nearest Ensembl:ENSG00000107968
Gene Name:mitogen-activated protein kinase kinase kinase 8
Gene Alias:AURA2
Gene Description:mitogen-activated protein kinase kinase kinase 8
Gene Type:protein-coding
CpG%:0.1
GC%:0.726368
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):