Difference between revisions of "TSS:Hg 104754.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=-4 | |distance_to_tss=-4 | ||
|end=43371650 | |end=43371650 | ||
| + | |end_of_center_position=43371640 | ||
|entrez_id=53828 | |entrez_id=53828 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=43371629 | |start=43371629 | ||
| + | |start_of_center_position=43371639 | ||
|strand=+ | |strand=+ | ||
|tata_box="-37(GGGTTTAAAGAG,-,0.00),-35(GTTTAAAGAGCC,+,0.00)" | |tata_box="-37(GGGTTTAAAGAG,-,0.00),-35(GTTTAAAGAGCC,+,0.00)" | ||
Revision as of 02:40, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 43371639 |
|---|---|
| End of the center position in the TSS region: | 43371640 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000476166.5 ENST00000616495.1 NM_173160 NM_001184963 uc001jaq.2 uc057swf.1 BC054876 AY358584 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENST00000476166.5:0 ENST00000616495.1:0 NM_173160:0 NM_001184963:0 uc001jaq.2:0 uc057swf.1:0 BC054876:0 AY358584:0 ENST00000480834.5:3 uc057swg.1:3 |
TATA-Box annotation
| Distance to TSS: | -4 |
|---|---|
| Nearest PromoterID: | NM_001184963 |
| Entrez ID: | 53828 |
| Nearest Unigene: | Hs.130497 |
| Nearest Refseq: | NM_173160 |
| Nearest Ensembl: | ENSG00000150201 |
| Gene Name: | FXYD domain containing ion transport regulator 4 |
| Gene Alias: | CHIF |
| Gene Description: | FXYD domain containing ion transport regulator 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-37(GGGTTTAAAGAG,-,0.00),-35(GTTTAAAGAGCC,+,0.00)" |
