Difference between revisions of "TSS:Hg 105025.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=59079 | |distance_to_tss=59079 | ||
|end=59236557 | |end=59236557 | ||
| + | |end_of_center_position=59236546 | ||
|entrez_id=84457 | |entrez_id=84457 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=59236534 | |start=59236534 | ||
| + | |start_of_center_position=59236545 | ||
|strand=+ | |strand=+ | ||
|tata_box="-3(TGGTTTTTAAGC,-,0.00),-1(GTTTTTAAGCCC,+,0.00)" | |tata_box="-3(TGGTTTTTAAGC,-,0.00),-1(GTTTTTAAGCCC,+,0.00)" | ||
Revision as of 03:38, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 59236545 |
|---|---|
| End of the center position in the TSS region: | 59236546 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000472199.1 uc057tjy.1 |
|---|---|
| Distance: | -8 |
| Num_trans: | 3 |
| All_trans: | ENST00000472199.1:-8 uc057tjy.1:-8 AB058699:16 |
TATA-Box annotation
| Distance to TSS: | 59079 |
|---|---|
| Nearest PromoterID: | NM_001143774 |
| Entrez ID: | 84457 |
| Nearest Unigene: | Hs.499704 |
| Nearest Refseq: | NM_032439 |
| Nearest Ensembl: | ENSG00000165443 |
| Gene Name: | phytanoyl-CoA 2-hydroxylase interacting protein like |
| Gene Alias: | - |
| Gene Description: | phytanoyl-CoA 2-hydroxylase interacting protein like |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-3(TGGTTTTTAAGC,-,0.00),-1(GTTTTTAAGCCC,+,0.00)" |
