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Difference between revisions of "TSS:Hg 109556.1"

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Line 7: Line 7:
 
|distance_to_tss=26
 
|distance_to_tss=26
 
|end=60733535
 
|end=60733535
 +
|end_of_center_position=60733501
 
|entrez_id=288
 
|entrez_id=288
 
|gc_percent=0.756219
 
|gc_percent=0.756219
|gene_alias=ANKYRIN-G|MRT37
+
|gene_alias=ANKYRIN-G
 
|gene_description=ankyrin 3
 
|gene_description=ankyrin 3
 
|gene_id=288
 
|gene_id=288
Line 25: Line 26:
 
|species=human
 
|species=human
 
|start=60733465
 
|start=60733465
 +
|start_of_center_position=60733500
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000373827.6 NM_001204403 uc001jkz.5 BX648574
 
|transcript_name=ENST00000373827.6 NM_001204403 uc001jkz.5 BX648574

Revision as of 03:51, 12 May 2019

Basic information about the TSS


TSS ID:hg_109556.1
Species:human
Chr:chr10
TSS Classification:yes
Start:60733465
End:60733535
Strand:-
TSS Score:1
Start of the center position in the TSS region:60733500
End of the center position in the TSS region:60733501



Gene and protein annotation


Transcript_name:ENST00000373827.6 NM_001204403 uc001jkz.5 BX648574
Distance:0
GeneID:288
HGNC/MGI_ID:HGNC:494
UniProt_ID:Q12955
Gene_name:"ankyrin 3, node of Ranvier (ankyrin G)"
Gene_symbol:ANK3
Gene_synonyms:
Gene_source:HGNC:494



Transcript annotation


Transcript_name:ENST00000373827.6 NM_001204403 uc001jkz.5 BX648574
Distance:0
Num_trans:10
All_trans:ENST00000373827.6:0 NM_001204403:0 uc001jkz.5:0 BX648574:0 BX537917:69 ENST00000510382.1:142 uc057tmh.1:142 AK172736:142 EU832293:146 EU832377:146



TATA-Box annotation


Distance to TSS:26
Nearest PromoterID:NM_001204403
Entrez ID:288
Nearest Unigene:Hs.499725
Nearest Refseq:NM_001149
Nearest Ensembl:ENSG00000151150
Gene Name:"ankyrin 3, node of Ranvier (ankyrin G)"
Gene Alias:ANKYRIN-G
Gene Description:ankyrin 3
Gene Type:protein-coding
CpG%:0.135
GC%:0.756219
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):