Difference between revisions of "TSS:Mm 43304.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000100641.2:-55 AK142429:-55 |chr=chr5 |cpg_percent=0.02 |distance=-55 |distance_to_tss=1694 |end=134676563 |entrez_id=16885 |gc_percent=0.5870...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |LIMK-1= | ||
| + | |Limk= | ||
|all_trans=ENSMUST00000100641.2:-55 AK142429:-55 | |all_trans=ENSMUST00000100641.2:-55 AK142429:-55 | ||
|chr=chr5 | |chr=chr5 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=1694 | |distance_to_tss=1694 | ||
|end=134676563 | |end=134676563 | ||
| + | |end_of_center_position=134676554 | ||
|entrez_id=16885 | |entrez_id=16885 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=KIZ-1 | + | |gene_alias=KIZ-1 |
|gene_description="LIM-domain containing, protein kinase" | |gene_description="LIM-domain containing, protein kinase" | ||
|gene_id=100038504 | |gene_id=100038504 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=134676544 | |start=134676544 | ||
| + | |start_of_center_position=134676553 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000100641.2 AK142429 | |transcript_name=ENSMUST00000100641.2 AK142429 | ||
Revision as of 04:32, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 134676553 |
|---|---|
| End of the center position in the TSS region: | 134676554 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000100641.2 AK142429 |
|---|---|
| Distance: | -55 |
| Num_trans: | 2 |
| All_trans: | ENSMUST00000100641.2:-55 AK142429:-55 |
TATA-Box annotation
| Distance to TSS: | 1694 |
|---|---|
| Nearest PromoterID: | NM_001305875 |
| Entrez ID: | 16885 |
| Nearest Unigene: | Mm.15409 |
| Nearest Refseq: | NM_010717 |
| Nearest Ensembl: | ENSMUSG00000029674 |
| Gene Name: | predicted gene 10369 |
| Gene Alias: | KIZ-1 |
| Gene Description: | "LIM-domain containing, protein kinase" |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
