Difference between revisions of "TSS:Hg 105574.1"
From referenceTSS
| Line 10: | Line 10: | ||
|distance_to_tss=8 | |distance_to_tss=8 | ||
|end=73998139 | |end=73998139 | ||
| + | |end_of_center_position=73998123 | ||
|entrez_id=7414 | |entrez_id=7414 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias=CMD1W | + | |gene_alias=CMD1W |
|gene_description=vinculin | |gene_description=vinculin | ||
|gene_id=7414 | |gene_id=7414 | ||
| Line 28: | Line 29: | ||
|species=human | |species=human | ||
|start=73998105 | |start=73998105 | ||
| + | |start_of_center_position=73998122 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000624354.3 ENST00000211998.8 ENST00000372755.7 ENST00000478896.2 NM_014000 NM_003373 uc010qky.2 uc001jwd.4 uc001jwe.4 uc057uer.1 AK304823 EU794673 AK300280 AK296509 BC099919 BC039174 | |transcript_name=ENST00000624354.3 ENST00000211998.8 ENST00000372755.7 ENST00000478896.2 NM_014000 NM_003373 uc010qky.2 uc001jwd.4 uc001jwe.4 uc057uer.1 AK304823 EU794673 AK300280 AK296509 BC099919 BC039174 | ||
Revision as of 05:16, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 73998122 |
|---|---|
| End of the center position in the TSS region: | 73998123 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000624354.3 ENST00000211998.8 ENST00000372755.7 ENST00000478896.2 NM_014000 NM_003373 uc010qky.2 uc001jwd.4 uc001jwe.4 uc057uer.1 AK304823 EU794673 AK300280 AK296509 BC099919 BC039174 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000624354.3:0 ENST00000211998.8:0 ENST00000372755.7:0 ENST00000478896.2:0 NM_014000:0 NM_003373:0 uc010qky.2:0 uc001jwd.4:0 uc001jwe.4:0 uc057uer.1:0 AK304823:0 EU794673:0 AK300280:0 AK296509:0 BC099919:0 BC039174:0 M33308:26 AB385172:65 DQ894680:69 |
TATA-Box annotation
| Distance to TSS: | 8 |
|---|---|
| Nearest PromoterID: | NM_014000 |
| Entrez ID: | 7414 |
| Nearest Unigene: | Hs.643896 |
| Nearest Refseq: | NM_003373 |
| Nearest Ensembl: | ENSG00000035403 |
| Gene Name: | vinculin |
| Gene Alias: | CMD1W |
| Gene Description: | vinculin |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
