Difference between revisions of "TSS:Hg 105815.1"
From referenceTSS
| Line 15: | Line 15: | ||
|distance_to_tss=3400 | |distance_to_tss=3400 | ||
|end=79614339 | |end=79614339 | ||
| + | |end_of_center_position=79614339 | ||
|entrez_id=653509 | |entrez_id=653509 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias=COLEC4 | + | |gene_alias=COLEC4 |
|gene_description=surfactant protein A1 | |gene_description=surfactant protein A1 | ||
|gene_name=SFTPA1 | |gene_name=SFTPA1 | ||
| Line 28: | Line 29: | ||
|species=human | |species=human | ||
|start=79614338 | |start=79614338 | ||
| + | |start_of_center_position=79614338 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK309522 | |transcript_name=AK309522 | ||
Revision as of 05:50, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 79614338 |
|---|---|
| End of the center position in the TSS region: | 79614339 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK309522 |
|---|---|
| Distance: | -462 |
| Num_trans: | 1 |
| All_trans: | AK309522:-462 |
TATA-Box annotation
| Distance to TSS: | 3400 |
|---|---|
| Nearest PromoterID: | NM_001164646 |
| Entrez ID: | 653509 |
| Nearest Unigene: | Hs.535295 |
| Nearest Refseq: | NM_005411 |
| Nearest Ensembl: | ENSG00000122852 |
| Gene Name: | SFTPA1 |
| Gene Alias: | COLEC4 |
| Gene Description: | surfactant protein A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
