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Difference between revisions of "TSS:Hg 106209.1"

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Line 6: Line 6:
 
|distance_to_tss=-13
 
|distance_to_tss=-13
 
|end=91220591
 
|end=91220591
 +
|end_of_center_position=91220589
 
|entrez_id=84333
 
|entrez_id=84333
 
|gc_percent=0.810945
 
|gc_percent=0.810945
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|species=human
 
|species=human
 
|start=91220586
 
|start=91220586
 +
|start_of_center_position=91220588
 
|strand=+
 
|strand=+
 
|transcript_name=NR_046310 NM_032373
 
|transcript_name=NR_046310 NM_032373

Revision as of 06:47, 12 May 2019

Basic information about the TSS


TSS ID:hg_106209.1
Species:human
Chr:chr10
TSS Classification:yes
Start:91220586
End:91220591
Strand:+
TSS Score:1
Start of the center position in the TSS region:91220588
End of the center position in the TSS region:91220589



Gene and protein annotation


Transcript_name:NR_046310 NM_032373
Distance:11
GeneID:84333
HGNC/MGI_ID:HGNC:28264
UniProt_ID:Q86SE9
Gene_name:polycomb group ring finger 5
Gene_symbol:PCGF5
Gene_synonyms:MGC16202
Gene_source:HGNC:28264



Transcript annotation


Transcript_name:NR_046310 NM_032373
Distance:11
Num_trans:13
All_trans:NR_046310:11 NM_032373:11 ENST00000490164.1:192 uc031pwu.2:192 ENST00000336126.5:197 uc001khi.5:197 AL832496:197 ENST00000496708.1:-410 uc057uvn.1:-410 ENST00000543648.5:-436 NM_001256549:-436 uc010qnk.4:-436 AK303014:-436



TATA-Box annotation


Distance to TSS:-13
Nearest PromoterID:NM_032373
Entrez ID:84333
Nearest Unigene:Hs.500512
Nearest Refseq:NM_032373
Nearest Ensembl:ENSG00000180628
Gene Name:polycomb group ring finger 5
Gene Alias:RNF159
Gene Description:polycomb group ring finger 5
Gene Type:protein-coding
CpG%:0.135
GC%:0.810945
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):