Difference between revisions of "TSS:Hg 106613.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=204 | |distance_to_tss=204 | ||
|end=100745932 | |end=100745932 | ||
| + | |end_of_center_position=100745916 | ||
|entrez_id=5076 | |entrez_id=5076 | ||
|gc_percent=0.771144 | |gc_percent=0.771144 | ||
| − | |gene_alias=FSGS7 | + | |gene_alias=FSGS7 |
|gene_description=paired box 2 | |gene_description=paired box 2 | ||
|gene_id=5076 | |gene_id=5076 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=100745898 | |start=100745898 | ||
| + | |start_of_center_position=100745915 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000355243.7 ENST00000370296.6 ENST00000428433.5 NM_003989 NM_003990 NM_000278 NM_003988 NM_003987 uc001kro.4 uc001krl.4 uc001krm.4 L25597 M89470 | |transcript_name=ENST00000355243.7 ENST00000370296.6 ENST00000428433.5 NM_003989 NM_003990 NM_000278 NM_003988 NM_003987 uc001kro.4 uc001krl.4 uc001krm.4 L25597 M89470 | ||
Revision as of 07:51, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 100745915 |
|---|---|
| End of the center position in the TSS region: | 100745916 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000355243.7 ENST00000370296.6 ENST00000428433.5 NM_003989 NM_003990 NM_000278 NM_003988 NM_003987 uc001kro.4 uc001krl.4 uc001krm.4 L25597 M89470 |
|---|---|
| Distance: | -188 |
| Num_trans: | 24 |
| All_trans: | ENST00000355243.7:-188 ENST00000370296.6:-188 ENST00000428433.5:-188 NM_003989:-188 NM_003990:-188 NM_000278:-188 NM_003988:-188 NM_003987:-188 uc001kro.4:-188 uc001krl.4:-188 uc001krm.4:-188 L25597:-188 M89470:-188 ENST00000554363.2:247 uc057vkp.1:247 ENST00000361791.7:288 uc010qps.3:288 ENST00000427256.5:296 uc057vkq.1:296 AB463994:327 BC141452:327 BC148710:327 ENST00000483202.2:332 uc057vkr.1:332 |
TATA-Box annotation
| Distance to TSS: | 204 |
|---|---|
| Nearest PromoterID: | NM_003989 |
| Entrez ID: | 5076 |
| Nearest Unigene: | Hs.155644 |
| Nearest Refseq: | NM_000278 |
| Nearest Ensembl: | ENSG00000075891 |
| Gene Name: | paired box 2 |
| Gene Alias: | FSGS7 |
| Gene Description: | paired box 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
