Difference between revisions of "TSS:Hg 111087.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=7 | |distance_to_tss=7 | ||
|end=101131145 | |end=101131145 | ||
| + | |end_of_center_position=101131140 | ||
|entrez_id=100038246 | |entrez_id=100038246 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| − | |gene_alias=APT-B7 | + | |gene_alias=APT-B7 |
|gene_description=TLX1 neighbor | |gene_description=TLX1 neighbor | ||
|gene_id=100038246 | |gene_id=100038246 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=101131133 | |start=101131133 | ||
| + | |start_of_center_position=101131139 | ||
|strand=- | |strand=- | ||
|tata_box="63(AGGCTTAAAAGG,-,0.00),65(GCTTAAAAGGAA,+,0.00)" | |tata_box="63(AGGCTTAAAAGG,-,0.00),65(GCTTAAAAGGAA,+,0.00)" | ||
Revision as of 07:56, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 101131139 |
|---|---|
| End of the center position in the TSS region: | 101131140 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NR_130723 NR_130722 BC019674 |
|---|---|
| Distance: | -1 |
| Num_trans: | 7 |
| All_trans: | NR_130723:-1 NR_130722:-1 BC019674:-1 ENST00000445873.5:8 ENST00000425505.1:8 uc001ksv.4:8 uc057vml.1:8 |
TATA-Box annotation
| Distance to TSS: | 7 |
|---|---|
| Nearest PromoterID: | NR_130723 |
| Entrez ID: | 100038246 |
| Nearest Unigene: | Hs.368784 |
| Nearest Refseq: | NM_001085398 |
| Nearest Ensembl: | ENSG00000236311 |
| Gene Name: | TLX1 neighbor |
| Gene Alias: | APT-B7 |
| Gene Description: | TLX1 neighbor |
| Gene Type: | ncRNA |
| CpG%: | 0.05 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "63(AGGCTTAAAAGG,-,0.00),65(GCTTAAAAGGAA,+,0.00)" |
