Personal tools

Difference between revisions of "TSS:Hg 106706.1"

From referenceTSS

Jump to: navigation, search
Line 10: Line 10:
 
|distance_to_tss=331
 
|distance_to_tss=331
 
|end=102395930
 
|end=102395930
 +
|end_of_center_position=102395927
 
|entrez_id=4791
 
|entrez_id=4791
 
|gc_percent=0.636816
 
|gc_percent=0.636816
|gene_alias=CVID10|H2TF1|LYT-10|LYT10|NF-kB2|p100|p49/p100|p52
+
|gene_alias=CVID10
 
|gene_description=nuclear factor kappa B subunit 2
 
|gene_description=nuclear factor kappa B subunit 2
 
|gene_id=4791
 
|gene_id=4791
Line 31: Line 32:
 
|species=human
 
|species=human
 
|start=102395923
 
|start=102395923
 +
|start_of_center_position=102395926
 
|strand=+
 
|strand=+
 
|transcript_name=AB384801
 
|transcript_name=AB384801

Revision as of 08:08, 12 May 2019

Basic information about the TSS


TSS ID:hg_106706.1
Species:human
Chr:chr10
TSS Classification:yes
Start:102395923
End:102395930
Strand:+
TSS Score:1
Start of the center position in the TSS region:102395926
End of the center position in the TSS region:102395927



Gene and protein annotation


Transcript_name:AB384801
Distance:29
GeneID:4791
HGNC/MGI_ID:HGNC:7795
UniProt_ID:
Gene_name:nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Gene_symbol:NFKB2
Gene_synonyms:LYT-10 NF-kB2 p105 p49/p100 p52
Gene_source:HGNC:7795



Transcript annotation


Transcript_name:AB384801
Distance:29
Num_trans:16
All_trans:AB384801:29 U09609:30 BT009769:30 AK292654:-181 ENST00000610498.1:-218 ENST00000467116.5:-218 ENST00000189444.10:-218 uc057vpn.1:-218 uc057vpo.1:-218 uc001kvd.6:-218 X61499:-218 X61498:-218 ENST00000471698.5:-231 uc057vpm.1:-231 NM_001261403:-328 NM_002502:-328



TATA-Box annotation


Distance to TSS:331
Nearest PromoterID:NM_001261403
Entrez ID:4791
Nearest Unigene:Hs.73090
Nearest Refseq:NM_002502
Nearest Ensembl:ENSG00000077150
Gene Name:nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Gene Alias:CVID10
Gene Description:nuclear factor kappa B subunit 2
Gene Type:protein-coding
CpG%:0.05
GC%:0.636816
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):