Difference between revisions of "TSS:Hg 187107.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000615116.1:-338 NM_016558:-338 uc021wct.1:-338 ENST00000305978.6:373 NM_033630:373 uc002xen.3:373 AF207829:493 |chr=chr20 |cpg_percent=0.07 |dist...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |SDP1= | ||
|all_trans=ENST00000615116.1:-338 NM_016558:-338 uc021wct.1:-338 ENST00000305978.6:373 NM_033630:373 uc002xen.3:373 AF207829:493 | |all_trans=ENST00000615116.1:-338 NM_016558:-338 uc021wct.1:-338 ENST00000305978.6:373 NM_033630:373 uc002xen.3:373 AF207829:493 | ||
|chr=chr20 | |chr=chr20 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=349 | |distance_to_tss=349 | ||
|end=35955021 | |end=35955021 | ||
| + | |end_of_center_position=35955010 | ||
|entrez_id=51282 | |entrez_id=51282 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| − | |gene_alias=RAZ1 | + | |gene_alias=RAZ1 |
|gene_description=SCAN domain containing 1 | |gene_description=SCAN domain containing 1 | ||
|gene_id=51282 | |gene_id=51282 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=35954998 | |start=35954998 | ||
| + | |start_of_center_position=35955009 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000615116.1 NM_016558 uc021wct.1 | |transcript_name=ENST00000615116.1 NM_016558 uc021wct.1 | ||
Revision as of 10:16, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 35955009 |
|---|---|
| End of the center position in the TSS region: | 35955010 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000615116.1 NM_016558 uc021wct.1 |
|---|---|
| Distance: | -338 |
| Num_trans: | 7 |
| All_trans: | ENST00000615116.1:-338 NM_016558:-338 uc021wct.1:-338 ENST00000305978.6:373 NM_033630:373 uc002xen.3:373 AF207829:493 |
TATA-Box annotation
| Distance to TSS: | 349 |
|---|---|
| Nearest PromoterID: | NM_016558 |
| Entrez ID: | 51282 |
| Nearest Unigene: | Hs.584909 |
| Nearest Refseq: | NM_016558 |
| Nearest Ensembl: | ENSG00000171222 |
| Gene Name: | SCAN domain containing 1 |
| Gene Alias: | RAZ1 |
| Gene Description: | SCAN domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
