Difference between revisions of "TSS:Mm 50353.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000130896.1:0 ENSMUST00000204879.1:0 ENSMUST00000204121.1:0 AK137310:0 AK089041:0 BC085128:0 BC092301:-4 BC013644:-4 AK170797:-13 ENSMUST000001...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Ap4= | ||
| + | |E430037F08Rik= | ||
| + | |Zfp-464= | ||
| + | |Zfp464= | ||
|all_trans=ENSMUST00000130896.1:0 ENSMUST00000204879.1:0 ENSMUST00000204121.1:0 AK137310:0 AK089041:0 BC085128:0 BC092301:-4 BC013644:-4 AK170797:-13 ENSMUST00000135151.2:-31 AK206412:39 ENSMUST00000118229.1:-40 ENSMUST00000154010.7:-48 ENSMUST00000009420.14:-48 ENSMUST00000163452.6:-48 NM_001079905:-48 NM_175099:-48 NM_001079904:-48 NM_001079903:-48 NM_001079902:-48 NM_001079901:-48 uc009buv.1:-48 uc009buw.1:-48 uc009bux.1:-48 uc009buy.1:-48 uc009buz.1:-48 uc009bva.1:-48 ENSMUST00000150030.1:367 | |all_trans=ENSMUST00000130896.1:0 ENSMUST00000204879.1:0 ENSMUST00000204121.1:0 AK137310:0 AK089041:0 BC085128:0 BC092301:-4 BC013644:-4 AK170797:-13 ENSMUST00000135151.2:-31 AK206412:39 ENSMUST00000118229.1:-40 ENSMUST00000154010.7:-48 ENSMUST00000009420.14:-48 ENSMUST00000163452.6:-48 NM_001079905:-48 NM_175099:-48 NM_001079904:-48 NM_001079903:-48 NM_001079902:-48 NM_001079901:-48 uc009buv.1:-48 uc009buw.1:-48 uc009bux.1:-48 uc009buy.1:-48 uc009buz.1:-48 uc009bva.1:-48 ENSMUST00000150030.1:367 | ||
|chr=chr6 | |chr=chr6 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=58 | |distance_to_tss=58 | ||
|end=48593952 | |end=48593952 | ||
| + | |end_of_center_position=48593942 | ||
|entrez_id=58887 | |entrez_id=58887 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=AI425994 | + | |gene_alias=AI425994 |
|gene_description=replication initiator 1 | |gene_description=replication initiator 1 | ||
|gene_id=58887 | |gene_id=58887 | ||
| Line 24: | Line 29: | ||
|species=mouse | |species=mouse | ||
|start=48593930 | |start=48593930 | ||
| + | |start_of_center_position=48593941 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000130896.1 ENSMUST00000204879.1 ENSMUST00000204121.1 AK137310 AK089041 BC085128 | |transcript_name=ENSMUST00000130896.1 ENSMUST00000204879.1 ENSMUST00000204121.1 AK137310 AK089041 BC085128 | ||
Revision as of 10:22, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 48593941 |
|---|---|
| End of the center position in the TSS region: | 48593942 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000130896.1 ENSMUST00000204879.1 ENSMUST00000204121.1 AK137310 AK089041 BC085128 |
|---|---|
| Distance: | 0 |
| Num_trans: | 28 |
| All_trans: | ENSMUST00000130896.1:0 ENSMUST00000204879.1:0 ENSMUST00000204121.1:0 AK137310:0 AK089041:0 BC085128:0 BC092301:-4 BC013644:-4 AK170797:-13 ENSMUST00000135151.2:-31 AK206412:39 ENSMUST00000118229.1:-40 ENSMUST00000154010.7:-48 ENSMUST00000009420.14:-48 ENSMUST00000163452.6:-48 NM_001079905:-48 NM_175099:-48 NM_001079904:-48 NM_001079903:-48 NM_001079902:-48 NM_001079901:-48 uc009buv.1:-48 uc009buw.1:-48 uc009bux.1:-48 uc009buy.1:-48 uc009buz.1:-48 uc009bva.1:-48 ENSMUST00000150030.1:367 |
TATA-Box annotation
| Distance to TSS: | 58 |
|---|---|
| Nearest PromoterID: | NM_001079904 |
| Entrez ID: | 58887 |
| Nearest Unigene: | Mm.219183 |
| Nearest Refseq: | NM_175099 |
| Nearest Ensembl: | ENSMUSG00000052751 |
| Gene Name: | replication initiator 1 |
| Gene Alias: | AI425994 |
| Gene Description: | replication initiator 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
