Difference between revisions of "TSS:Mm 99525.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000042286.11:277 NM_001077698:308 NM_019679:308 uc007ltu.1:308 uc007ltv.1:308 BC148411:478 BC156635:478 ENSMUST00000107027.8:483 AF215666:483 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AI553564= | ||
| + | |Fmnl= | ||
| + | |Fnrl= | ||
| + | |Frls= | ||
|all_trans=ENSMUST00000042286.11:277 NM_001077698:308 NM_019679:308 uc007ltu.1:308 uc007ltv.1:308 BC148411:478 BC156635:478 ENSMUST00000107027.8:483 AF215666:483 | |all_trans=ENSMUST00000042286.11:277 NM_001077698:308 NM_019679:308 uc007ltu.1:308 uc007ltv.1:308 BC148411:478 BC156635:478 ENSMUST00000107027.8:483 AF215666:483 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=-344 | |distance_to_tss=-344 | ||
|end=103170830 | |end=103170830 | ||
| + | |end_of_center_position=103170794 | ||
|entrez_id=57778 | |entrez_id=57778 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=8030453N10Rik | + | |gene_alias=8030453N10Rik |
|gene_description=formin-like 1 | |gene_description=formin-like 1 | ||
|gene_id=57778 | |gene_id=57778 | ||
| Line 24: | Line 29: | ||
|species=mouse | |species=mouse | ||
|start=103170757 | |start=103170757 | ||
| + | |start_of_center_position=103170793 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000042286.11 | |transcript_name=ENSMUST00000042286.11 | ||
Revision as of 10:29, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 103170793 |
|---|---|
| End of the center position in the TSS region: | 103170794 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000042286.11 |
|---|---|
| Distance: | 277 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000042286.11:277 NM_001077698:308 NM_019679:308 uc007ltu.1:308 uc007ltv.1:308 BC148411:478 BC156635:478 ENSMUST00000107027.8:483 AF215666:483 |
TATA-Box annotation
| Distance to TSS: | -344 |
|---|---|
| Nearest PromoterID: | NM_001077698 |
| Entrez ID: | 57778 |
| Nearest Unigene: | Mm.138913 |
| Nearest Refseq: | NM_019679 |
| Nearest Ensembl: | ENSMUSG00000055805 |
| Gene Name: | formin-like 1 |
| Gene Alias: | 8030453N10Rik |
| Gene Description: | formin-like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
