Difference between revisions of "TSS:Hg 112048.1"
From referenceTSS
| Line 9: | Line 9: | ||
|distance_to_tss=-504 | |distance_to_tss=-504 | ||
|end=129964337 | |end=129964337 | ||
| + | |end_of_center_position=129964332 | ||
|entrez_id=253738 | |entrez_id=253738 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| − | |gene_alias=COE3 | + | |gene_alias=COE3 |
|gene_description=early B-cell factor 3 | |gene_description=early B-cell factor 3 | ||
|gene_id=253738 | |gene_id=253738 | ||
| Line 27: | Line 28: | ||
|species=human | |species=human | ||
|start=129964325 | |start=129964325 | ||
| + | |start_of_center_position=129964331 | ||
|strand=- | |strand=- | ||
|tata_box="-35(TCCCATATATGG,-,0.00),-33(CCATATATGGCG,+,0.00)" | |tata_box="-35(TCCCATATATGG,-,0.00),-33(CCATATATGGCG,+,0.00)" | ||
Revision as of 10:36, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 129964331 |
|---|---|
| End of the center position in the TSS region: | 129964332 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK097335 |
|---|---|
| Distance: | 52 |
| Num_trans: | 6 |
| All_trans: | AK097335:52 ENST00000368648.7:485 ENST00000355311.9:485 uc001lki.3:485 uc057wvu.1:485 NM_001005463:499 |
TATA-Box annotation
| Distance to TSS: | -504 |
|---|---|
| Nearest PromoterID: | NM_001005463 |
| Entrez ID: | 253738 |
| Nearest Unigene: | Hs.591374 |
| Nearest Refseq: | NM_001005463 |
| Nearest Ensembl: | ENSG00000108001 |
| Gene Name: | early B-cell factor 3 |
| Gene Alias: | COE3 |
| Gene Description: | early B-cell factor 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-35(TCCCATATATGG,-,0.00),-33(CCATATATGGCG,+,0.00)" |
