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Difference between revisions of "TSS:Mm 99580.1"

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(Created page with "{{TSSDetail |all_trans=ENSMUST00000138384.7:0 ENSMUST00000145227.7:0 AK038797:0 AK147636:0 BC014748:0 AK078167:-3 ENSMUST00000106993.9:8 NM_001285456:-30 NM_001285455:-30 NM_0...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|AW045860=
 +
|Mtapt=
 +
|Tau=
 
|all_trans=ENSMUST00000138384.7:0 ENSMUST00000145227.7:0 AK038797:0 AK147636:0 BC014748:0 AK078167:-3 ENSMUST00000106993.9:8 NM_001285456:-30 NM_001285455:-30 NM_001285454:-30 NM_001038609:-30 NM_010838:-30 uc007lwe.1:-30 uc007lwg.2:-30 uc007lwh.2:-30 uc007lwf.2:-30 uc007lwi.2:-30 uc011yga.2:-30 M18775:-30 M18776:-30 U12914:45 U12915:45 U12916:45 ENSMUST00000132977.7:66 ENSMUST00000146353.1:72 ENSMUST00000132245.7:74 ENSMUST00000106992.9:-76 ENSMUST00000100347.10:77
 
|all_trans=ENSMUST00000138384.7:0 ENSMUST00000145227.7:0 AK038797:0 AK147636:0 BC014748:0 AK078167:-3 ENSMUST00000106993.9:8 NM_001285456:-30 NM_001285455:-30 NM_001285454:-30 NM_001038609:-30 NM_010838:-30 uc007lwe.1:-30 uc007lwg.2:-30 uc007lwh.2:-30 uc007lwf.2:-30 uc007lwi.2:-30 uc011yga.2:-30 M18775:-30 M18776:-30 U12914:45 U12915:45 U12916:45 ENSMUST00000132977.7:66 ENSMUST00000146353.1:72 ENSMUST00000132245.7:74 ENSMUST00000106992.9:-76 ENSMUST00000100347.10:77
 
|chr=chr11
 
|chr=chr11
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|distance_to_tss=50
 
|distance_to_tss=50
 
|end=104231507
 
|end=104231507
 +
|end_of_center_position=104231487
 
|entrez_id=17762
 
|entrez_id=17762
 
|gc_percent=0.736318
 
|gc_percent=0.736318
|gene_alias=AI413597|AW045860|Mtapt|Tau
+
|gene_alias=AI413597
 
|gene_description=microtubule-associated protein tau
 
|gene_description=microtubule-associated protein tau
 
|gene_id=17762
 
|gene_id=17762
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|species=mouse
 
|species=mouse
 
|start=104231465
 
|start=104231465
 +
|start_of_center_position=104231486
 
|strand=+
 
|strand=+
 
|transcript_name=ENSMUST00000138384.7 ENSMUST00000145227.7 AK038797 AK147636 BC014748
 
|transcript_name=ENSMUST00000138384.7 ENSMUST00000145227.7 AK038797 AK147636 BC014748

Revision as of 10:38, 12 May 2019

Basic information about the TSS


TSS ID:mm_99580.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:104231465
End:104231507
Strand:+
TSS Score:1
Start of the center position in the TSS region:104231486
End of the center position in the TSS region:104231487



Gene and protein annotation


Transcript_name:ENSMUST00000138384.7 ENSMUST00000145227.7 AK038797 AK147636 BC014748
Distance:0
GeneID:17762
HGNC/MGI_ID:MGI:97180
UniProt_ID:B1AQW4 Q3UH19
Gene_name:microtubule-associated protein tau
Gene_symbol:Mapt
Gene_synonyms:Mtapt Tau
Gene_source:MGI:97180



Transcript annotation


Transcript_name:ENSMUST00000138384.7 ENSMUST00000145227.7 AK038797 AK147636 BC014748
Distance:0
Num_trans:28
All_trans:ENSMUST00000138384.7:0 ENSMUST00000145227.7:0 AK038797:0 AK147636:0 BC014748:0 AK078167:-3 ENSMUST00000106993.9:8 NM_001285456:-30 NM_001285455:-30 NM_001285454:-30 NM_001038609:-30 NM_010838:-30 uc007lwe.1:-30 uc007lwg.2:-30 uc007lwh.2:-30 uc007lwf.2:-30 uc007lwi.2:-30 uc011yga.2:-30 M18775:-30 M18776:-30 U12914:45 U12915:45 U12916:45 ENSMUST00000132977.7:66 ENSMUST00000146353.1:72 ENSMUST00000132245.7:74 ENSMUST00000106992.9:-76 ENSMUST00000100347.10:77



TATA-Box annotation


Distance to TSS:50
Nearest PromoterID:NM_001285454
Entrez ID:17762
Nearest Unigene:Mm.1287
Nearest Refseq:NM_010838
Nearest Ensembl:ENSMUSG00000018411
Gene Name:microtubule-associated protein tau
Gene Alias:AI413597
Gene Description:microtubule-associated protein tau
Gene Type:protein-coding
CpG%:0.125
GC%:0.736318
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):