Difference between revisions of "TSS:Hg 184542.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK312468:0 BC001696:5 BC033629:-19 ENST00000495457.1:41 uc061wwu.1:41 ENST00000462548.6:-56 uc061wwt.1:-56 DQ372938:-109 AB463518:155 CU689672:156 KJ899...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CREPT= | ||
| + | |NET60= | ||
|all_trans=AK312468:0 BC001696:5 BC033629:-19 ENST00000495457.1:41 uc061wwu.1:41 ENST00000462548.6:-56 uc061wwt.1:-56 DQ372938:-109 AB463518:155 CU689672:156 KJ899384:156 ENST00000373433.8:-235 NM_021215:-235 uc002xho.5:-235 | |all_trans=AK312468:0 BC001696:5 BC033629:-19 ENST00000495457.1:41 uc061wwu.1:41 ENST00000462548.6:-56 uc061wwt.1:-56 DQ372938:-109 AB463518:155 CU689672:156 KJ899384:156 ENST00000373433.8:-235 NM_021215:-235 uc002xho.5:-235 | ||
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| + | |dJ1057B20.2= | ||
|distance=0 | |distance=0 | ||
|distance_to_tss=240 | |distance_to_tss=240 | ||
|end=38033791 | |end=38033791 | ||
| + | |end_of_center_position=38033786 | ||
|entrez_id=58490 | |entrez_id=58490 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=C20orf77 | + | |gene_alias=C20orf77 |
|gene_description=regulation of nuclear pre-mRNA domain containing 1B | |gene_description=regulation of nuclear pre-mRNA domain containing 1B | ||
|gene_id=58490 | |gene_id=58490 | ||
| Line 24: | Line 28: | ||
|species=human | |species=human | ||
|start=38033780 | |start=38033780 | ||
| + | |start_of_center_position=38033785 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK312468 | |transcript_name=AK312468 | ||
Revision as of 10:39, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 38033785 |
|---|---|
| End of the center position in the TSS region: | 38033786 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK312468 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | AK312468:0 BC001696:5 BC033629:-19 ENST00000495457.1:41 uc061wwu.1:41 ENST00000462548.6:-56 uc061wwt.1:-56 DQ372938:-109 AB463518:155 CU689672:156 KJ899384:156 ENST00000373433.8:-235 NM_021215:-235 uc002xho.5:-235 |
TATA-Box annotation
| Distance to TSS: | 240 |
|---|---|
| Nearest PromoterID: | NM_021215 |
| Entrez ID: | 58490 |
| Nearest Unigene: | Hs.278839 |
| Nearest Refseq: | NM_021215 |
| Nearest Ensembl: | ENSG00000101413 |
| Gene Name: | regulation of nuclear pre-mRNA domain containing 1B |
| Gene Alias: | C20orf77 |
| Gene Description: | regulation of nuclear pre-mRNA domain containing 1B |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
