Difference between revisions of "TSS:Hg 184564.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000417318.3:0 uc061wxo.1:0 ENST00000489102.2:17 uc061wxp.1:17 |chr=chr20 |cpg_percent=0.01 |distance=0 |distance_to_tss=13491 |end=38317655 |entre...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=13491 | |distance_to_tss=13491 | ||
|end=38317655 | |end=38317655 | ||
| + | |end_of_center_position=38317642 | ||
|entrez_id=671 | |entrez_id=671 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| − | |gene_alias=BPIFD1 | + | |gene_alias=BPIFD1 |
|gene_description=bactericidal/permeability-increasing protein | |gene_description=bactericidal/permeability-increasing protein | ||
|gene_id=671 | |gene_id=671 | ||
| Line 22: | Line 23: | ||
|nearest_unigene=Hs.529019 | |nearest_unigene=Hs.529019 | ||
|num_trans=4 | |num_trans=4 | ||
| + | |rBPI= | ||
|species=human | |species=human | ||
|start=38317627 | |start=38317627 | ||
| + | |start_of_center_position=38317641 | ||
|strand=+ | |strand=+ | ||
|tata_box="-72(CCTTTTATGACC,+,0.00)" | |tata_box="-72(CCTTTTATGACC,+,0.00)" | ||
Revision as of 10:44, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 38317641 |
|---|---|
| End of the center position in the TSS region: | 38317642 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000417318.3 uc061wxo.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENST00000417318.3:0 uc061wxo.1:0 ENST00000489102.2:17 uc061wxp.1:17 |
TATA-Box annotation
| Distance to TSS: | 13491 |
|---|---|
| Nearest PromoterID: | NM_001725 |
| Entrez ID: | 671 |
| Nearest Unigene: | Hs.529019 |
| Nearest Refseq: | NM_001725 |
| Nearest Ensembl: | ENSG00000101425 |
| Gene Name: | bactericidal/permeability-increasing protein |
| Gene Alias: | BPIFD1 |
| Gene Description: | bactericidal/permeability-increasing protein |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-72(CCTTTTATGACC,+,0.00)" |
