Difference between revisions of "TSS:Mm 163241.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000049995.9:25 ENSMUST00000100332.3:25 NM_172568:25 NM_001039242:25 uc007lxj.2:25 uc007lxl.2:25 BC100474:32 AK132734:36 |chr=chr11 |cpg_percent...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AV039223= | ||
| + | |OTTMUSG00000002847= | ||
| + | |Rnf190= | ||
|all_trans=ENSMUST00000049995.9:25 ENSMUST00000100332.3:25 NM_172568:25 NM_001039242:25 uc007lxj.2:25 uc007lxl.2:25 BC100474:32 AK132734:36 | |all_trans=ENSMUST00000049995.9:25 ENSMUST00000100332.3:25 NM_172568:25 NM_001039242:25 uc007lxj.2:25 uc007lxl.2:25 BC100474:32 AK132734:36 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-27 | |distance_to_tss=-27 | ||
|end=105456764 | |end=105456764 | ||
| + | |end_of_center_position=105456762 | ||
|entrez_id=632687 | |entrez_id=632687 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| − | |gene_alias=4933417C16Rik | + | |gene_alias=4933417C16Rik |
|gene_description=membrane-associated ring finger (C3HC4) 10 | |gene_description=membrane-associated ring finger (C3HC4) 10 | ||
|gene_id=632687 | |gene_id=632687 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=105456759 | |start=105456759 | ||
| + | |start_of_center_position=105456761 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000049995.9 ENSMUST00000100332.3 NM_172568 NM_001039242 uc007lxj.2 uc007lxl.2 | |transcript_name=ENSMUST00000049995.9 ENSMUST00000100332.3 NM_172568 NM_001039242 uc007lxj.2 uc007lxl.2 | ||
Revision as of 10:46, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 105456761 |
|---|---|
| End of the center position in the TSS region: | 105456762 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000049995.9 ENSMUST00000100332.3 NM_172568 NM_001039242 uc007lxj.2 uc007lxl.2 |
|---|---|
| Distance: | 25 |
| Num_trans: | 8 |
| All_trans: | ENSMUST00000049995.9:25 ENSMUST00000100332.3:25 NM_172568:25 NM_001039242:25 uc007lxj.2:25 uc007lxl.2:25 BC100474:32 AK132734:36 |
TATA-Box annotation
| Distance to TSS: | -27 |
|---|---|
| Nearest PromoterID: | NM_001039242 |
| Entrez ID: | 632687 |
| Nearest Unigene: | Mm.121570 |
| Nearest Refseq: | NM_172568 |
| Nearest Ensembl: | ENSMUSG00000078627 |
| Gene Name: | membrane-associated ring finger (C3HC4) 10 |
| Gene Alias: | 4933417C16Rik |
| Gene Description: | membrane-associated ring finger (C3HC4) 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
