Difference between revisions of "TSS:Mm 99650.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK019982:148 ENSMUST00000168598.7:151 NM_181071:151 uc007lxm.1:151 ENSMUST00000100330.9:156 AK051973:156 |chr=chr11 |cpg_percent=0.185 |distance=148 |di...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |5730590C14Rik= | ||
|all_trans=AK019982:148 ENSMUST00000168598.7:151 NM_181071:151 uc007lxm.1:151 ENSMUST00000100330.9:156 AK051973:156 | |all_trans=AK019982:148 ENSMUST00000168598.7:151 NM_181071:151 uc007lxm.1:151 ENSMUST00000100330.9:156 AK051973:156 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-154 | |distance_to_tss=-154 | ||
|end=105589835 | |end=105589835 | ||
| + | |end_of_center_position=105589832 | ||
|entrez_id=77097 | |entrez_id=77097 | ||
|gc_percent=0.855721 | |gc_percent=0.855721 | ||
| − | |gene_alias=3526402J09Rik | + | |gene_alias=3526402J09Rik |
|gene_description="tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2" | |gene_description="tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2" | ||
|gene_id=77097 | |gene_id=77097 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=105589828 | |start=105589828 | ||
| + | |start_of_center_position=105589831 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK019982 | |transcript_name=AK019982 | ||
Revision as of 10:46, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 105589831 |
|---|---|
| End of the center position in the TSS region: | 105589832 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK019982 |
|---|---|
| Distance: | 148 |
| Num_trans: | 6 |
| All_trans: | AK019982:148 ENSMUST00000168598.7:151 NM_181071:151 uc007lxm.1:151 ENSMUST00000100330.9:156 AK051973:156 |
TATA-Box annotation
| Distance to TSS: | -154 |
|---|---|
| Nearest PromoterID: | NM_181071 |
| Entrez ID: | 77097 |
| Nearest Unigene: | Mm.22501 |
| Nearest Refseq: | NM_175492 |
| Nearest Ensembl: | ENSMUSG00000053580 |
| Gene Name: | "tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2" |
| Gene Alias: | 3526402J09Rik |
| Gene Description: | "tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2" |
| Gene Type: | protein-coding |
| CpG%: | 0.185 |
| GC%: | 0.855721 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
