Difference between revisions of "TSS:Mm 99686.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC048722:8 BC048165:11 AK137813:-20 ENSMUST00000106891.1:-29 AK080823:-29 AK165674:-45 AK154757:-45 AK005902:-50 ENSMUST00000058438.8:-57 NM_027946:-57...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |2610037L01Rik= | ||
| + | |C86529= | ||
| + | |HAN11= | ||
| + | |Wdr68= | ||
|all_trans=BC048722:8 BC048165:11 AK137813:-20 ENSMUST00000106891.1:-29 AK080823:-29 AK165674:-45 AK154757:-45 AK005902:-50 ENSMUST00000058438.8:-57 NM_027946:-57 uc007lxy.1:-57 uc007lxz.1:-57 AK047435:-57 | |all_trans=BC048722:8 BC048165:11 AK137813:-20 ENSMUST00000106891.1:-29 AK080823:-29 AK165674:-45 AK154757:-45 AK005902:-50 ENSMUST00000058438.8:-57 NM_027946:-57 uc007lxy.1:-57 uc007lxz.1:-57 AK047435:-57 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=65 | |distance_to_tss=65 | ||
|end=106036945 | |end=106036945 | ||
| + | |end_of_center_position=106036937 | ||
|entrez_id=71833 | |entrez_id=71833 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| − | |gene_alias=1700012F10Rik | + | |gene_alias=1700012F10Rik |
|gene_description=DDB1 and CUL4 associated factor 7 | |gene_description=DDB1 and CUL4 associated factor 7 | ||
|gene_id=71833 | |gene_id=71833 | ||
| Line 24: | Line 29: | ||
|species=mouse | |species=mouse | ||
|start=106036928 | |start=106036928 | ||
| + | |start_of_center_position=106036936 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BC048722 | |transcript_name=BC048722 | ||
Revision as of 10:50, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 106036936 |
|---|---|
| End of the center position in the TSS region: | 106036937 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC048722 |
|---|---|
| Distance: | 8 |
| Num_trans: | 13 |
| All_trans: | BC048722:8 BC048165:11 AK137813:-20 ENSMUST00000106891.1:-29 AK080823:-29 AK165674:-45 AK154757:-45 AK005902:-50 ENSMUST00000058438.8:-57 NM_027946:-57 uc007lxy.1:-57 uc007lxz.1:-57 AK047435:-57 |
TATA-Box annotation
| Distance to TSS: | 65 |
|---|---|
| Nearest PromoterID: | NM_027946 |
| Entrez ID: | 71833 |
| Nearest Unigene: | Mm.307455 |
| Nearest Refseq: | NM_027946 |
| Nearest Ensembl: | ENSMUSG00000049354 |
| Gene Name: | DDB1 and CUL4 associated factor 7 |
| Gene Alias: | 1700012F10Rik |
| Gene Description: | DDB1 and CUL4 associated factor 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
