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Difference between revisions of "TSS:Mm 99705.1"

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(Created page with "{{TSSDetail |all_trans=AK131734:-254 |chr=chr11 |cpg_percent=0.125 |distance=-254 |distance_to_tss=-164 |end=106160319 |entrez_id=67803 |gc_percent=0.721393 |gene_alias=061002...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|AI413966=
 
|all_trans=AK131734:-254
 
|all_trans=AK131734:-254
 
|chr=chr11
 
|chr=chr11
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|distance_to_tss=-164
 
|distance_to_tss=-164
 
|end=106160319
 
|end=106160319
 +
|end_of_center_position=106160307
 
|entrez_id=67803
 
|entrez_id=67803
 
|gc_percent=0.721393
 
|gc_percent=0.721393
|gene_alias=0610025L06Rik|AI413966
+
|gene_alias=0610025L06Rik
 
|gene_description=LIM domain containing 2
 
|gene_description=LIM domain containing 2
 
|gene_id=100038448
 
|gene_id=100038448
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|species=mouse
 
|species=mouse
 
|start=106160293
 
|start=106160293
 +
|start_of_center_position=106160306
 
|strand=+
 
|strand=+
 
|transcript_name=AK131734
 
|transcript_name=AK131734

Revision as of 10:53, 12 May 2019

Basic information about the TSS


TSS ID:mm_99705.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:106160293
End:106160319
Strand:+
TSS Score:1
Start of the center position in the TSS region:106160306
End of the center position in the TSS region:106160307



Gene and protein annotation


Transcript_name:AK131734
Distance:-254
GeneID:100038448
HGNC/MGI_ID:MGI:3642918
UniProt_ID:
Gene_name:predicted gene 10840
Gene_symbol:Gm10840
Gene_synonyms:
Gene_source:MGI:3642918



Transcript annotation


Transcript_name:AK131734
Distance:-254
Num_trans:1
All_trans:AK131734:-254



TATA-Box annotation


Distance to TSS:-164
Nearest PromoterID:NM_172397
Entrez ID:67803
Nearest Unigene:Mm.21687
Nearest Refseq:NM_172397
Nearest Ensembl:ENSMUSG00000040699
Gene Name:predicted gene 10840
Gene Alias:0610025L06Rik
Gene Description:LIM domain containing 2
Gene Type:protein-coding
CpG%:0.125
GC%:0.721393
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):