Difference between revisions of "TSS:Mm 99709.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK169816:5 AK021013:41 ENSMUST00000021046.5:-46 NM_028074:-46 uc007lyk.2:-46 uc007lyl.2:-46 AK049311:-46 AK171730:85 AK134182:135 |chr=chr11 |cpg_percen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AW319508= | ||
| + | |AW556242= | ||
| + | |B430002H05Rik= | ||
| + | |RHELP= | ||
| + | |RNAHP= | ||
| + | |SF3b125= | ||
|all_trans=AK169816:5 AK021013:41 ENSMUST00000021046.5:-46 NM_028074:-46 uc007lyk.2:-46 uc007lyl.2:-46 AK049311:-46 AK171730:85 AK134182:135 | |all_trans=AK169816:5 AK021013:41 ENSMUST00000021046.5:-46 NM_028074:-46 uc007lyk.2:-46 uc007lyl.2:-46 AK049311:-46 AK171730:85 AK134182:135 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 12: | ||
|distance_to_tss=48 | |distance_to_tss=48 | ||
|end=106216976 | |end=106216976 | ||
| + | |end_of_center_position=106216974 | ||
|entrez_id=72047 | |entrez_id=72047 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=1810047H21Rik | + | |gene_alias=1810047H21Rik |
|gene_description=DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 | |gene_description=DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 | ||
|gene_id=72047 | |gene_id=72047 | ||
| Line 24: | Line 31: | ||
|species=mouse | |species=mouse | ||
|start=106216971 | |start=106216971 | ||
| + | |start_of_center_position=106216973 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK169816 | |transcript_name=AK169816 | ||
Revision as of 10:54, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 106216973 |
|---|---|
| End of the center position in the TSS region: | 106216974 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK169816 |
|---|---|
| Distance: | 5 |
| Num_trans: | 9 |
| All_trans: | AK169816:5 AK021013:41 ENSMUST00000021046.5:-46 NM_028074:-46 uc007lyk.2:-46 uc007lyl.2:-46 AK049311:-46 AK171730:85 AK134182:135 |
TATA-Box annotation
| Distance to TSS: | 48 |
|---|---|
| Nearest PromoterID: | NM_028074 |
| Entrez ID: | 72047 |
| Nearest Unigene: | Mm.41367 |
| Nearest Refseq: | NM_028074 |
| Nearest Ensembl: | ENSMUSG00000020705 |
| Gene Name: | DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 |
| Gene Alias: | 1810047H21Rik |
| Gene Description: | DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
