Difference between revisions of "TSS:Mm 99755.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |Gm885= | ||
| + | |Mca32= | ||
|all_trans=ENSMUST00000182896.7:-3 ENSMUST00000182908.7:-3 ENSMUST00000086353.10:-3 BC139224:-3 BC139225:-3 BC145580:-3 BC145582:-3 ENSMUST00000183111.7:14 AK169925:14 ENSMUST00000147326.8:-17 ENSMUST00000106794.8:17 ENSMUST00000182023.1:17 NM_001271372:-17 NM_001271375:-17 NM_001271374:-17 NM_001033435:-17 NM_001271373:-17 NR_073165:-17 uc007lzj.2:-17 uc011ygl.2:-17 uc011ygk.2:-17 uc011ygm.2:-17 uc007lzk.2:-17 uc007lzl.2:-17 AB542953:17 AK136488:17 AK171381:17 AK137500:17 AK151814:18 AK170947:18 AK153506:70 | |all_trans=ENSMUST00000182896.7:-3 ENSMUST00000182908.7:-3 ENSMUST00000086353.10:-3 BC139224:-3 BC139225:-3 BC145580:-3 BC145582:-3 ENSMUST00000183111.7:14 AK169925:14 ENSMUST00000147326.8:-17 ENSMUST00000106794.8:17 ENSMUST00000182023.1:17 NM_001271372:-17 NM_001271375:-17 NM_001271374:-17 NM_001033435:-17 NM_001271373:-17 NR_073165:-17 uc007lzj.2:-17 uc011ygl.2:-17 uc011ygk.2:-17 uc011ygm.2:-17 uc007lzk.2:-17 uc007lzl.2:-17 AB542953:17 AK136488:17 AK171381:17 AK137500:17 AK151814:18 AK170947:18 AK153506:70 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=21 | |distance_to_tss=21 | ||
|end=106751251 | |end=106751251 | ||
| + | |end_of_center_position=106751247 | ||
|entrez_id=380732 | |entrez_id=380732 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| − | |gene_alias=Allergin-1 | + | |gene_alias=Allergin-1 |
|gene_description=mast cell immunoglobulin like receptor 1 | |gene_description=mast cell immunoglobulin like receptor 1 | ||
|gene_id=380732 | |gene_id=380732 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=106751242 | |start=106751242 | ||
| + | |start_of_center_position=106751246 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000182896.7 ENSMUST00000182908.7 ENSMUST00000086353.10 BC139224 BC139225 BC145580 BC145582 | |transcript_name=ENSMUST00000182896.7 ENSMUST00000182908.7 ENSMUST00000086353.10 BC139224 BC139225 BC145580 BC145582 | ||
Revision as of 11:04, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 106751246 |
|---|---|
| End of the center position in the TSS region: | 106751247 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000182896.7 ENSMUST00000182908.7 ENSMUST00000086353.10 BC139224 BC139225 BC145580 BC145582 |
|---|---|
| Distance: | -3 |
| Num_trans: | 31 |
| All_trans: | ENSMUST00000182896.7:-3 ENSMUST00000182908.7:-3 ENSMUST00000086353.10:-3 BC139224:-3 BC139225:-3 BC145580:-3 BC145582:-3 ENSMUST00000183111.7:14 AK169925:14 ENSMUST00000147326.8:-17 ENSMUST00000106794.8:17 ENSMUST00000182023.1:17 NM_001271372:-17 NM_001271375:-17 NM_001271374:-17 NM_001033435:-17 NM_001271373:-17 NR_073165:-17 uc007lzj.2:-17 uc011ygl.2:-17 uc011ygk.2:-17 uc011ygm.2:-17 uc007lzk.2:-17 uc007lzl.2:-17 AB542953:17 AK136488:17 AK171381:17 AK137500:17 AK151814:18 AK170947:18 AK153506:70 |
TATA-Box annotation
| Distance to TSS: | 21 |
|---|---|
| Nearest PromoterID: | NM_001033435 |
| Entrez ID: | 380732 |
| Nearest Unigene: | Mm.343952 |
| Nearest Refseq: | NM_001033435 |
| Nearest Ensembl: | ENSMUSG00000040528 |
| Gene Name: | mast cell immunoglobulin like receptor 1 |
| Gene Alias: | Allergin-1 |
| Gene Description: | mast cell immunoglobulin like receptor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
