Difference between revisions of "TSS:Mm 99757.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK153506:-289 AK151814:-341 AK170947:-341 ENSMUST00000106794.8:-342 ENSMUST00000182023.1:-342 AB542953:-342 AK136488:-342 AK171381:-342 AK137500:-342 EN...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Gm885= | ||
| + | |Mca32= | ||
|all_trans=AK153506:-289 AK151814:-341 AK170947:-341 ENSMUST00000106794.8:-342 ENSMUST00000182023.1:-342 AB542953:-342 AK136488:-342 AK171381:-342 AK137500:-342 ENSMUST00000183111.7:-345 AK169925:-345 ENSMUST00000182896.7:-370 ENSMUST00000182908.7:-370 ENSMUST00000086353.10:-370 BC139224:-370 BC139225:-370 BC145580:-370 BC145582:-370 ENSMUST00000147326.8:-384 NM_001271372:-384 NM_001271375:-384 NM_001271374:-384 NM_001033435:-384 NM_001271373:-384 NR_073165:-384 uc007lzj.2:-384 uc011ygl.2:-384 uc011ygk.2:-384 uc011ygm.2:-384 uc007lzk.2:-384 uc007lzl.2:-384 | |all_trans=AK153506:-289 AK151814:-341 AK170947:-341 ENSMUST00000106794.8:-342 ENSMUST00000182023.1:-342 AB542953:-342 AK136488:-342 AK171381:-342 AK137500:-342 ENSMUST00000183111.7:-345 AK169925:-345 ENSMUST00000182896.7:-370 ENSMUST00000182908.7:-370 ENSMUST00000086353.10:-370 BC139224:-370 BC139225:-370 BC145580:-370 BC145582:-370 ENSMUST00000147326.8:-384 NM_001271372:-384 NM_001271375:-384 NM_001271374:-384 NM_001033435:-384 NM_001271373:-384 NR_073165:-384 uc007lzj.2:-384 uc011ygl.2:-384 uc011ygk.2:-384 uc011ygm.2:-384 uc007lzk.2:-384 uc007lzl.2:-384 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=402 | |distance_to_tss=402 | ||
|end=106751647 | |end=106751647 | ||
| + | |end_of_center_position=106751629 | ||
|entrez_id=380732 | |entrez_id=380732 | ||
|gc_percent=0.368159 | |gc_percent=0.368159 | ||
| − | |gene_alias=Allergin-1 | + | |gene_alias=Allergin-1 |
|gene_description=mast cell immunoglobulin like receptor 1 | |gene_description=mast cell immunoglobulin like receptor 1 | ||
|gene_id=380732 | |gene_id=380732 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=106751609 | |start=106751609 | ||
| + | |start_of_center_position=106751628 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK153506 | |transcript_name=AK153506 | ||
Revision as of 11:05, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 106751628 |
|---|---|
| End of the center position in the TSS region: | 106751629 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK153506 |
|---|---|
| Distance: | -289 |
| Num_trans: | 31 |
| All_trans: | AK153506:-289 AK151814:-341 AK170947:-341 ENSMUST00000106794.8:-342 ENSMUST00000182023.1:-342 AB542953:-342 AK136488:-342 AK171381:-342 AK137500:-342 ENSMUST00000183111.7:-345 AK169925:-345 ENSMUST00000182896.7:-370 ENSMUST00000182908.7:-370 ENSMUST00000086353.10:-370 BC139224:-370 BC139225:-370 BC145580:-370 BC145582:-370 ENSMUST00000147326.8:-384 NM_001271372:-384 NM_001271375:-384 NM_001271374:-384 NM_001033435:-384 NM_001271373:-384 NR_073165:-384 uc007lzj.2:-384 uc011ygl.2:-384 uc011ygk.2:-384 uc011ygm.2:-384 uc007lzk.2:-384 uc007lzl.2:-384 |
TATA-Box annotation
| Distance to TSS: | 402 |
|---|---|
| Nearest PromoterID: | NM_001033435 |
| Entrez ID: | 380732 |
| Nearest Unigene: | Mm.343952 |
| Nearest Refseq: | NM_001033435 |
| Nearest Ensembl: | ENSMUSG00000040528 |
| Gene Name: | mast cell immunoglobulin like receptor 1 |
| Gene Alias: | Allergin-1 |
| Gene Description: | mast cell immunoglobulin like receptor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.368159 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
